Pairwise Alignments

Query, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 116/473 (24%), Positives = 186/473 (39%), Gaps = 55/473 (11%)

Query: 20  QVAIGHPQVQVSHVDDVLRMQPVEPLAPLPARLLERLVHWAQVRPDTTFIAARQADGAWR 79
           ++++GHP+  VS     L   P    + +PA     L+   + +    F   +      +
Sbjct: 3   ELSLGHPE-NVSVAKRWLASYPPGVPSEIPASANASLIDLLE-KSCKQFADRKAFSSMGK 60

Query: 80  SISYVQMLADVRTIAANLLGLGLSAERPLALLSGNDIEHLQIALGAMYAGIAYCPVSPAY 139
           S++Y ++ AD R +AA L   GL     +A++  N +++     G + AG+    V+P Y
Sbjct: 61  SLTYRELDADTRAVAAWLQSRGLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLY 120

Query: 140 A------LLSQDFAKLRHVCEVLTPGVVFVSDSQPFQRAFEAVLDDSVG---------VI 184
                   L    AK   V E               +    A + D +G         V 
Sbjct: 121 TPRELEHQLKDSGAKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGLKGHIVNLVVR 180

Query: 185 SVRGQVAGRP---HISFDSLLQPGDLAAADAAFAATGPDTIAKFLFTSGSTKLPKAVITT 241
            V+  V        ISF ++L+ G   +       T  D IA   +T G+T + K  + T
Sbjct: 181 KVKKLVPAHAIPGSISFKAMLKEGQGVSLKPV-GLTAQD-IAFLQYTGGTTGVSKGAVLT 238

Query: 242 QRMLCANQQMLL----QTFPTFAEEPPVL--VDWLPWNHTFGGSHN--LGIVLYNGGSFY 293
              L AN+  +       F    + P VL  +  LP  H F  + N  +GI L  GG   
Sbjct: 239 HANLLANKAQISLWLDAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIAL--GGHNL 296

Query: 294 LDAGKPTPQGFAETLRNLR-EISPTAYLTVPKGWEELVKALEQDPALREVFFARIKLFFF 352
           L A      GF + L + +  I P        G   L  AL  +   R++  + +     
Sbjct: 297 LIANPRDIPGFVKELSHYQPHIFP--------GLTTLFNALMNNEEFRKLDLSSLIFVLG 348

Query: 353 AAAGLSQSVWDRLDRIAEQHCGERIRMMAGLGMTEASPSCTFTT-GPLSMAGYVGLPAPG 411
               + + V +R   +      E      G G++E SP  T         +G +GLP   
Sbjct: 349 GGMAVQRPVAERWVSVVGCPITE------GYGLSETSPVATVNRLDAAEFSGTIGLPISS 402

Query: 412 CEVKL-------VPVGDKLEARFRGPHIMPGYWRSPQQTAEAFDEEGFYCSGD 457
            E+ +       +P G+  E   RGP +M GYW+ P +TA+A   +GF+ SGD
Sbjct: 403 TEIDIRDEDGNSLPTGEVGEICIRGPQVMAGYWQRPDETAKAITADGFFRSGD 455