Pairwise Alignments

Query, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  127 bits (319), Expect = 5e-34
 Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 5/171 (2%)

Query: 205 HRLAMVA-SCTDELTGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGH 263
           H+ A+ A S TD LTGL N  ++ D    +  +C+   +   + ++D+DHFKQINDT GH
Sbjct: 176 HKRALSALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQSHATIALIDIDHFKQINDTHGH 235

Query: 264 AAGDQVLQRIGAAISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRV 323
             GD VL+++   +  +LR+ND+AGR GG+EF ++LP  P + A +V ER+R   +  R 
Sbjct: 236 IVGDAVLRQLSLELRRNLRENDLAGRYGGDEFCVILPQMPMEQAAQVMERMRETFSNYR- 294

Query: 324 NDEHP---VTASIGLAFAKAPATELGALLSSADSAMYLSKVSGRNRVTVAE 371
           N + P   V+ SIGLA  +   T+    L++AD A+Y +K +GRNRV +++
Sbjct: 295 NPQIPELRVSLSIGLADFQPVFTDAAMWLNAADRALYAAKDTGRNRVNMSD 345