Pairwise Alignments

Query, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 352 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  130 bits (327), Expect = 6e-35
 Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 31/334 (9%)

Query: 60  LGVSTGVRTAMFFAYLRAPANQRTAERWEWRYWVTLMLSAAIWGWGAFAVMPADDALGQT 119
           LG++ G    +F  Y   PA         W  W  ++++A +W   AF +     +  ++
Sbjct: 21  LGLTLGFVCVVFGMYPLDPA---------WWVWAWMLINAFVWPHVAFQLTRRSASALRS 71

Query: 120 -----LIMLFAVGMSVSAV--SCYSSYRNMTLVSMGLVLLPSTGWLLLQPSTLQQGIALA 172
                L   F  G  V A+  +   S   ++++SM  V +    ++L        G+  A
Sbjct: 72  ERRNLLFDSFCGGFWVGAMHFNPLPSVTTLSMMSMNNVAIGGPRFMLAGWVAQALGLGTA 131

Query: 173 VLVFA-WFVVSATQSLSSA---------LTTAW---RLKHEMQRAHRLAMVASCTDELTG 219
           +L+F   F+   TQ+   A         L   W   R    + R  R  +  S TD L+G
Sbjct: 132 LLIFTPAFIAVTTQAQLYACLPILMLYPLALGWICYRQALTLARHKRELLALSRTDSLSG 191

Query: 220 LNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAISA 279
           L N  A+ D+   +  RCR       + ++D+DHFK INDT+GH  GD VL+++   +  
Sbjct: 192 LLNHGAWKDHLEIEFQRCRRDSMGAVIALIDIDHFKTINDTYGHVTGDIVLRQLSKVLRQ 251

Query: 280 SLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVNDEHP--VTASIGLAF 337
           +LR  D+AGR GG+EF ++LP  P + A EV + LR     L    +    V+ SIGLA 
Sbjct: 252 NLRATDLAGRYGGDEFCVILPGMPLNRATEVMDALRDRFNALAYAQDPTLRVSLSIGLAP 311

Query: 338 AKAPATELGALLSSADSAMYLSKVSGRNRVTVAE 371
            +    +  + L+ AD A+Y +K SGRNRV+  +
Sbjct: 312 YQPTHADSTSWLNDADQALYDAKSSGRNRVSTVQ 345