Pairwise Alignments

Query, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 379 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  119 bits (299), Expect = 1e-31
 Identities = 84/220 (38%), Positives = 106/220 (48%), Gaps = 21/220 (9%)

Query: 158 LLLQPSTLQQGIALAVLVFAWFVVSATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDEL 217
           L +  S L  G A   LV A+F +       S       +    +R+ R  +V + TD L
Sbjct: 171 LAVMKSVLFPGYASINLVTAFFFIIMLNFAISLFV----MMLVAERSERKLLVLANTDPL 226

Query: 218 TGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAI 277
           TG+ NRR FF    A            A ++LD+DHFK IND FGHA GD VLQ +   I
Sbjct: 227 TGVKNRRFFFQTMPAA------PDPADAAMLLDIDHFKSINDRFGHAVGDSVLQEVARRI 280

Query: 278 SASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIA-------KLRVNDEHPVT 330
           S S+R  D+  R GGEEF I LP    D A  + ER+R  +A        LRV     VT
Sbjct: 281 SGSIRGGDVLARYGGEEFIIFLPGAGVDKACMIGERIRDAVAINEVDCGGLRVG----VT 336

Query: 331 ASIGLAFAKAPATELGALLSSADSAMYLSKVSGRNRVTVA 370
            SIG+A       +L  L   AD A+Y +K  GRN V  A
Sbjct: 337 ISIGVATTGDMRCDLQMLAEKADRALYRAKTEGRNCVREA 376