Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

 Score =  165 bits (417), Expect = 2e-45
 Identities = 103/261 (39%), Positives = 144/261 (55%), Gaps = 14/261 (5%)

Query: 1   MSPSVLEIRGLRIETQAG------VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDL 54
           M+  +L +R L +  + G      + V  V  +L +GE   LVG SGSGKS++ L +L L
Sbjct: 1   MTTPLLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKL 60

Query: 55  LP-PGLARTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIET 107
           LP P  +   G++L  G+ L   S      +RG   ++V Q P S+ NP+  +     E 
Sbjct: 61  LPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEM 120

Query: 108 L-RQRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFL 166
           L   RG+++  ARAR    L  VG+   E  L ++  QLSGG  QR+MIA+AL  E   L
Sbjct: 121 LILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLL 180

Query: 167 LADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVEC 226
           +ADEPT+ LD   QA+ L LL EL    G+ +L +THD+G+V + AD+V VM+ G IVE 
Sbjct: 181 IADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQ 240

Query: 227 QPAHELFQRPASATARTLLHA 247
             A E FQ P     + LL A
Sbjct: 241 GGAEETFQHPRHPYTQALLKA 261



 Score =  117 bits (292), Expect = 7e-31
 Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 25/264 (9%)

Query: 2   SPSVLEIRGLRI--ETQAGVL---------VHDVDLQLRRGEVCTLVGASGSGKSLSCLG 50
           +P V+E   L++    + G+L         V  V + +RRGE   +VG SGSGK+   L 
Sbjct: 274 APLVMEANDLKVYFPIKRGILRKTVGHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLA 333

Query: 51  LLDLLPPGLARTQGQLLLDGQPLAASSVRGRLT-----SLVLQNPRSAFNPVRNMASHAI 105
           LL L+      + G +   G+P+ A S +          +V Q+P  A +P  ++A    
Sbjct: 334 LLRLIS-----SAGPIAFLGKPIDALSFKAMRPLRSDLQIVFQDPFGALSPRMSVAEIVG 388

Query: 106 ETL--RQRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAET 163
           E L   QR +++    AR+   L  VGL    R    +  + SGG  QR+ IA A+  E 
Sbjct: 389 EGLLVHQRQLSADERDARVVAALADVGLDPETR--HRYPHEFSGGQRQRISIARAMALEP 446

Query: 164 PFLLADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRI 223
            F++ DEPTS LD + QA+ +DLL  L +   L  + ++HD+ VV+  A ++ VM  G++
Sbjct: 447 SFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLTFMFISHDLRVVSALASRILVMRNGKM 506

Query: 224 VECQPAHELFQRPASATARTLLHA 247
           VE  PAH++F+ P     R L  A
Sbjct: 507 VEEGPAHDVFEHPKEDYTRALFAA 530