Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 342 a.a., Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  153 bits (386), Expect = 5e-42
 Identities = 99/254 (38%), Positives = 144/254 (56%), Gaps = 11/254 (4%)

Query: 5   VLEIRGLRIE--TQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP-PGL 59
           +L+I+ L +E  TQ GVL  V  V L L  GEV  +VG SGSGKS++ + L+ L+  PG 
Sbjct: 3   LLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFPGR 62

Query: 60  ARTQ-----GQLLLDGQPLAASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQR-GI 113
            R +     G+ LL     A  S+ G+  +++ Q P ++ NP   +    +ETLR    +
Sbjct: 63  VRAEHMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHLKL 122

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
               A+ R    L+ VG+      L S+  QLSGGM QR+MIA+A+      L+ADEPT+
Sbjct: 123 DKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIADEPTT 182

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELF 233
            LD   QA+ LDLL +L +  G+ ++L+TH+MGVV+  A ++AVM AG+++E Q    LF
Sbjct: 183 ALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDHLF 242

Query: 234 QRPASATARTLLHA 247
             P       LL A
Sbjct: 243 ASPQHPYTEALLAA 256