Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 350 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  162 bits (411), Expect = 7e-45
 Identities = 100/255 (39%), Positives = 146/255 (57%), Gaps = 14/255 (5%)

Query: 4   SVLEIRGLRIE--TQAG--VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP--P 57
           ++L ++ L +E  T+ G  ++++ VD ++R GE   +VG SG GKS++ L LL L+P  P
Sbjct: 8   TLLRVQDLHVEFKTRRGQALVLNGVDFEIRAGETLCVVGESGCGKSMTALALLRLIPSPP 67

Query: 58  GLARTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-Q 110
           G  R+ GQ+L  G+ L  +S      VRG   S++ Q P ++ NPV  +     E+LR  
Sbjct: 68  GRIRS-GQVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVGEQIGESLRLH 126

Query: 111 RGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADE 170
            G+ +  A  R    L  VG+   ER +  +  QLSGGM QR+MIA+AL      L+ADE
Sbjct: 127 AGLNAHAASERAIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALACRPDILIADE 186

Query: 171 PTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAH 230
           PT+ LD   QA+  DLL EL +  G  ++L+THDMG VA  AD+V VM AGR++E     
Sbjct: 187 PTTALDVTVQAQIFDLLRELQRDKGTAIMLITHDMGAVAEMADRVMVMYAGRVIEQGTTE 246

Query: 231 ELFQRPASATARTLL 245
           ++   P     R L+
Sbjct: 247 QVLSEPGHPYTRGLI 261