Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 343 a.a., Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 2e-41
 Identities = 99/252 (39%), Positives = 137/252 (54%), Gaps = 11/252 (4%)

Query: 5   VLEIRGLR--IETQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           +LE+  LR    T AGV+  V  V   +R G    +VG SG GKS++ L +L L+P    
Sbjct: 16  LLEVDNLRTHFHTLAGVVRSVDGVSYTVRAGRTLGVVGESGCGKSVTALSILRLVPTPPG 75

Query: 61  RTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRGI 113
           R  G + L G  L   S      +RG   S++ Q P ++ NPV  +     ET++  +  
Sbjct: 76  RHMGAVRLRGTDLMQLSEREMRQIRGNRISMIFQEPMTSLNPVLTVGRQIAETVQLHQKA 135

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
           + A A  R    L  V + + ER +  +  QLSGGM QR+MIALAL      L+ADEPT+
Sbjct: 136 SRADALKRAVEMLRVVQIPEPERRVNEYPHQLSGGMRQRVMIALALACNPEVLIADEPTT 195

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELF 233
            LD   QA+ LDL+  L +  G+GV+++THD+GVVA   D+V VM AGR VE     +LF
Sbjct: 196 ALDVTIQAQILDLIKRLQKELGMGVVMITHDLGVVAESCDRVVVMYAGRKVEEADVIDLF 255

Query: 234 QRPASATARTLL 245
            RP     R L+
Sbjct: 256 DRPLHPYTRALM 267