Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  157 bits (398), Expect = 3e-43
 Identities = 93/252 (36%), Positives = 139/252 (55%), Gaps = 8/252 (3%)

Query: 4   SVLEIRGLRIETQAG-VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLART 62
           S+L++ GL +    G  LVH +   +  GE+  +VG SGSGK+L+   L+ L PP + RT
Sbjct: 8   SLLQVSGLTLALADGKALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRT 67

Query: 63  QGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRGITS 115
            G ++ DGQ + A S      +RG    +V Q P ++ NP   +     E L     ++ 
Sbjct: 68  AGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSP 127

Query: 116 AVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDL 175
           A  RAR+   L+ V + D    L ++  + SGGM QR+M+A A++     L+ADEPT+ L
Sbjct: 128 AQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTAL 187

Query: 176 DALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQR 235
           DA+ Q   +DL++EL + HG  VL+++HD+ +VAR  D++ VM  GRIVE      L   
Sbjct: 188 DAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSA 247

Query: 236 PASATARTLLHA 247
           P     R LL A
Sbjct: 248 PREDYTRKLLAA 259



 Score =  127 bits (319), Expect = 5e-34
 Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 21/258 (8%)

Query: 5   VLEIRGLRIETQAGV----------LVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDL 54
           +LE+ GL ++  AG            +  +DL++  GEV  LVG SGSGK+     +  L
Sbjct: 275 ILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGL 334

Query: 55  LPPGLARTQGQLLLDGQPLAASS---VRGRLT-SLVLQNPRSAFNPVRNMASHAIETLR- 109
           L P    + G++L +G+ +A  S    R R    +V Q+P S+ +P   + +   E L  
Sbjct: 335 LQP----SGGRILFEGKGIARRSEGWARYRAQCQMVFQDPASSLDPRMTVGASIGEALTG 390

Query: 110 QRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLAD 169
             G+T A  R R+   L  V L     V   +  +LSGG  QR+ IA A++    F++AD
Sbjct: 391 MPGLTPAARRGRILEVLQEVSLP--AEVASRYPHELSGGQRQRVAIARAVVRRPAFIVAD 448

Query: 170 EPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPA 229
           EP S LD   +A+ L+L  +L   HG   L ++HD+ VV + AD+V VM  G IVE  P 
Sbjct: 449 EPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVEQGPR 508

Query: 230 HELFQRPASATARTLLHA 247
            E+F RP     R LL A
Sbjct: 509 DEVFDRPHHDYTRELLAA 526