Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 329 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 2e-41
 Identities = 90/258 (34%), Positives = 135/258 (52%), Gaps = 12/258 (4%)

Query: 5   VLEIRGLRIETQA----GVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           +L+++ L IE Q        V  +D  L RGE   +VG SG GKS++ + L+ LLP   A
Sbjct: 3   LLQVKDLHIELQTQRGPAEAVRGIDFTLERGETLGIVGESGCGKSITVMSLMGLLP-STA 61

Query: 61  RTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRGI 113
           +  G +  DG  L          +RG    ++ Q P +A NPV  +A    E LR  RG+
Sbjct: 62  KVTGSIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLRLHRGL 121

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
           + A AR  +   L+ VG+ D    L ++  Q SGG  QR+ IA+AL      L+ADEPT+
Sbjct: 122 SKADARKEVLALLERVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPTT 181

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELF 233
            LD   Q + L+L+  LV   G+ ++L++HD+GV+A+   ++ VM  G +VE  P   +F
Sbjct: 182 ALDVTIQKQILELIQSLVAERGMALILISHDLGVIAQTVSKMLVMYGGSVVESGPTEAVF 241

Query: 234 QRPASATARTLLHAHQVL 251
            R A    + L  A   +
Sbjct: 242 ARRAHPYTQGLFAARPAI 259