Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

 Score =  170 bits (431), Expect = 5e-47
 Identities = 106/255 (41%), Positives = 143/255 (56%), Gaps = 12/255 (4%)

Query: 5   VLEIRGLRIETQAG----VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP-PGL 59
           +LEIR L I  + G     +V  V L +  GE   LVG SGSGKS++ L +L LLP P +
Sbjct: 6   LLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPPV 65

Query: 60  ARTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRG 112
               G +L  G+ L  +S      VRG   +++ Q P  + NP+  +     E L   RG
Sbjct: 66  VYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHRG 125

Query: 113 ITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPT 172
           +    AR  +  CL+ VG+    R L  F  QLSGG  QR+MIA+AL+ +   L+ADEPT
Sbjct: 126 MRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEPT 185

Query: 173 SDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHEL 232
           + LD   QA+ LDLL EL Q   +G+L +TH++ +V R AD+VAVM+AGR VE     EL
Sbjct: 186 TALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTREL 245

Query: 233 FQRPASATARTLLHA 247
           F  P     R LL+A
Sbjct: 246 FSAPQHPYTRQLLNA 260



 Score =  124 bits (310), Expect = 5e-33
 Identities = 87/229 (37%), Positives = 117/229 (51%), Gaps = 15/229 (6%)

Query: 24  VDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASS------ 77
           +   LRRGE   LVG SGSGKS + L LL LL     R++G++  DGQPL   +      
Sbjct: 306 LSFSLRRGESIGLVGESGSGKSTTGLALLRLL-----RSRGEIWFDGQPLHRFNHKQMLP 360

Query: 78  VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRGITSAVARARMAHCLDAVGLADTER 136
           VR R+  +V Q+P  + NP  N+     E LR    ++ A    R+   +  VGL    R
Sbjct: 361 VRRRI-QVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPDSR 419

Query: 137 VLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQVHGL 196
               +  + SGG  QR+ IA AL+ +   L+ DEPTS LD   QA+ L LL  L Q H L
Sbjct: 420 --HRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQL 477

Query: 197 GVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLL 245
             L ++HD+ VV     QV V+  G +VE     +LF+ P     R LL
Sbjct: 478 AYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526