Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  156 bits (395), Expect = 8e-43
 Identities = 94/254 (37%), Positives = 138/254 (54%), Gaps = 11/254 (4%)

Query: 5   VLEIRGLR----IETQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           VL +R L     ++ +   +V DV   ++ GE   +VG SGSGKS++ L L+ LL P  +
Sbjct: 6   VLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPASS 65

Query: 61  RTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETL-RQRGI 113
             +G++LL+G+ L   S      VRG   S++ Q P ++ NP+  +     E L R +G+
Sbjct: 66  HIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHKGL 125

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
           +   ARA     L+ V + +       +  Q SGGM QR+MIA+AL +    L+ADEPT+
Sbjct: 126 SKQEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADEPTT 185

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELF 233
            LD   Q + LDL+  L +  G+ VL +THDMGVVA  AD+  VM  G  VE     ++F
Sbjct: 186 ALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGATEDIF 245

Query: 234 QRPASATARTLLHA 247
           +R      R LL A
Sbjct: 246 RRGQHPYTRALLSA 259



 Score =  105 bits (262), Expect = 2e-27
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 12/240 (5%)

Query: 14  ETQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPL 73
           +T A   V +V   L +GE  +LVG SG GKS +   ++ L+ P    + G + LDG  +
Sbjct: 322 QTGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEP----SSGDVSLDGYDV 377

Query: 74  AASSVRG-----RLTSLVLQNPRSAFNPVRNMASHAIET-LRQRGITSAVARARMAHCLD 127
                 G     +   ++ Q+P S+ NP   + +   E  ++ R  ++  A+ + A  L+
Sbjct: 378 MRLDTVGLRNMRKSVQMIFQDPFSSLNPRMTVGTAISEPFIKHRLGSTKQAKEKTADLLE 437

Query: 128 AVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLL 187
            VGL+    +   +  + SGG  QR+ IA AL  +   ++ADE  S LD   +A+  +LL
Sbjct: 438 KVGLSAD--MANRYPHEFSGGQRQRIAIARALALDPKVIVADESVSALDVSIKAQVCNLL 495

Query: 188 MELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
           ++L Q   L  L ++HDM VV R + +VAVM  G IVE  P   +F  P     + L+ A
Sbjct: 496 LDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQHPYTKKLMAA 555