Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 6e-42
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 19/257 (7%)

Query: 5   VLEIRGLRIETQAGV----LVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           VL +R L ++   G+     V D+   L  GE+  ++G SGSGKS++   ++ LL P + 
Sbjct: 11  VLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPVIT 70

Query: 61  RTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQRGI- 113
            + G++   G  + A+       +RG+  S++ Q+P SA NP+  +     E L   G+ 
Sbjct: 71  VSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHGVG 130

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
           T     A++   L+ VGL D   +   + F+LSGG  QR+MIA+AL  +   L+ADEPT+
Sbjct: 131 TRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEPTT 190

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVE-------- 225
            LD  +QA+ L+L+ ++ +   + V+ +THD GVVA  AD+V VME G +VE        
Sbjct: 191 ALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQVL 250

Query: 226 CQPAHELFQRPASATAR 242
             P H   QR  +A  R
Sbjct: 251 INPVHPYTQRLVAAVPR 267



 Score =  103 bits (258), Expect = 6e-27
 Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 15/257 (5%)

Query: 3   PSVLEIRGLRIETQAG----------VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLL 52
           P VLE+  L  E ++             V++V  +LR+G+   +VG SGSGKS     LL
Sbjct: 280 PVVLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLL 339

Query: 53  DLLPP--GLARTQGQLLLDGQPLAASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQ 110
            LL P  G  R  G+ +      A  ++R  +  ++ Q+P ++ NP   +          
Sbjct: 340 KLLDPDGGAIRFDGRDIATMDESAFRALRPYI-QMIFQDPFASLNPRHTIGKILTVGPLA 398

Query: 111 RGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADE 170
            G+    AR +    L  VGL   E+    F  + SGG  QR+ IA ALM +   L+ADE
Sbjct: 399 HGMALHEARTKALGILKLVGL--DEQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADE 456

Query: 171 PTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAH 230
             S LD   QA+ L+LL  + +   + ++ +THD+ V ++  D V VM  G +VE  P  
Sbjct: 457 AVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPT 516

Query: 231 ELFQRPASATARTLLHA 247
           ++F+ P     + L+ A
Sbjct: 517 KIFRAPTHPYTQKLVAA 533