Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  145 bits (367), Expect = 2e-39
 Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 22/264 (8%)

Query: 5   VLEIRGLRIE--TQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           +L I  LR+      G +  V D  L++  G+V  LVG SGSGKS+    ++ + P   A
Sbjct: 7   LLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPK-TA 65

Query: 61  RTQGQLLLDGQPLAAS----------------SVRGRLTSLVLQNPRSAFNPVRNMASHA 104
           R  G++L      AA+                S+RG    L+ Q P ++F+P+  + +  
Sbjct: 66  RVNGRVLFTDPENAAAGPIDLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQI 125

Query: 105 IETLRQRGITSAVARA-RMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAET 163
            E LR   I S   RA +M   LD VG +  ++V+  + F+LSGGM QR MIA+AL+   
Sbjct: 126 DEALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICRP 185

Query: 164 PFLLADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRI 223
             L+ADEPT+ LD   QA+ L LL +L     + +LL+THD+GVVA  AD+VAV+  G I
Sbjct: 186 ALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGEI 245

Query: 224 VECQPAHELFQRPASATARTLLHA 247
           +E     ++F+ P     + L+ A
Sbjct: 246 MEAGTVDDIFKAPGHPYLKGLMAA 269



 Score =  103 bits (258), Expect = 7e-27
 Identities = 83/241 (34%), Positives = 119/241 (49%), Gaps = 10/241 (4%)

Query: 14  ETQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPG-----LARTQGQL-L 67
           +  A   V+ V  ++ RGE   LVG SGSGK+     L+  + P        R +G + +
Sbjct: 331 DANATKAVNSVSFEICRGECLGLVGESGSGKTTVSKILMRAVRPDEGSITFHRPEGDIDV 390

Query: 68  LDGQPLAASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQRGITSAVARARMAHCL- 126
           L+ +      +R ++  +V Q+P S+ +P   + +   E L   G   A  RA     L 
Sbjct: 391 LNAKDGDLKELRSKI-QMVFQDPISSLSPRMTVGNILSEPLEIHGRGDAKYRAEKVRGLV 449

Query: 127 DAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDL 186
            A+GL   E  L  +    SGG  QR+ IA AL      L+ DEP S LD   QA+ L+L
Sbjct: 450 RAIGLG--ESALNRYPHSFSGGQRQRIGIARALALGPELLICDEPVSALDVSVQAQILNL 507

Query: 187 LMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLH 246
           L +L Q  GL  L ++H++ VV   AD+VAVM  GRIVE  P   L + P     ++LL 
Sbjct: 508 LKDLQQDLGLTYLFISHNLAVVDYMADRVAVMCEGRIVELAPREILMRSPIHPYTKSLLA 567

Query: 247 A 247
           A
Sbjct: 568 A 568