Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  160 bits (406), Expect = 4e-44
 Identities = 99/255 (38%), Positives = 143/255 (56%), Gaps = 12/255 (4%)

Query: 5   VLEIRGLRIETQAG----VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP-PGL 59
           +L +R L +    G    V V  V   L  GEV  LVG SGSGKS++   +L LLP P  
Sbjct: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68

Query: 60  ARTQGQLLLDGQPL------AASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLR-QRG 112
           +   G++L DG+ +      A  +VRG   +++ Q P ++ NP+  +     E L   + 
Sbjct: 69  SHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQA 128

Query: 113 ITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPT 172
           IT A AR R    L  VG+ + E+ L+++  +LSGG  QR+MIA+AL      L+ADEPT
Sbjct: 129 ITGAEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPT 188

Query: 173 SDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHEL 232
           + LD   QA+ L+LL +L   HG+ +L +THD+G+V + AD+V VM  G+IVE     ++
Sbjct: 189 TALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248

Query: 233 FQRPASATARTLLHA 247
           F  P  A  R LL A
Sbjct: 249 FTDPQHAYTRHLLAA 263



 Score =  113 bits (282), Expect = 1e-29
 Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 16/235 (6%)

Query: 21  VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASS--- 77
           V  +D+ LR G+   +VG SGSGK+   L L  L+      ++G++   GQ + + S   
Sbjct: 306 VDGIDITLRAGQTVGVVGESGSGKTTLGLALSRLIA-----SKGRISFIGQSIDSYSYEM 360

Query: 78  ---VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR--QRGITSAVARARMAHCLDAVGLA 132
              +R RL  +V Q+P  + +P  ++     E L+  +R +++     R+A  L+ VGL 
Sbjct: 361 MKPLRNRL-QVVFQDPYGSLSPRMSVGEIIAEGLKVHERSLSADERDTRVATALEEVGLD 419

Query: 133 DTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQ 192
              R    +  + SGG  QR+ IA A++ +  F++ DEPTS LD   QA+ +DLL +L  
Sbjct: 420 PATR--WRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQA 477

Query: 193 VHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
            H L  L ++HD+ VV   A+ + VM  G++VE  PA E+F  P     + LL A
Sbjct: 478 KHELAYLFISHDLRVVKALANDLIVMRHGKVVESGPAAEIFANPQQDYTKALLAA 532