Pairwise Alignments

Query, 281 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  209 bits (532), Expect = 5e-59
 Identities = 111/262 (42%), Positives = 161/262 (61%)

Query: 19  MIGLALVGLLAVLALFGHWIAPHDPDLVDLGQRLQAPDARHWLGTDHLGRDLLSRLIVGT 78
           +IG  L+ +L VLA+      P++P  +DL  +LQ P   HWLGTD  GRD+ SR + G 
Sbjct: 9   LIGGVLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPPSMAHWLGTDEFGRDVASRAMQGA 68

Query: 79  RLSLGSVMLTLALVLALGLAVGGVAGFVGGRTDLLLMRLCDMFMTFPTLVLAFFFVTLLG 138
             S    +LT+ L  A+GL VG VAGFV G TD +LM   D  + FP L+LA   + ++G
Sbjct: 69  ATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVG 128

Query: 139 TGLSNVIIAIALSHWAWYARMVRGLVIAQRGREYVLASRLAGASRWARLRQHVLPNIAGP 198
                +++A+++++     R+VRG V++ R REYV ASR+ G S    + +H+LPN   P
Sbjct: 129 ANKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAP 188

Query: 199 LLVLATMDIGHMMLHVSGLSFLGLGVAPPTAEWGVMINDAKEFIWTQPQLLLLPGLMIFF 258
           + VLAT   G ++L  S LSFLGLGV PP   WG M+  A+ ++ +   L ++PGL I  
Sbjct: 189 VAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGLCIAL 248

Query: 259 SVMAFNLLGDALRDRLDPAQER 280
           +++  NLLG++LRDRLDP  E+
Sbjct: 249 TLLGINLLGESLRDRLDPRTEK 270