Pairwise Alignments

Query, 281 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  229 bits (583), Expect = 7e-65
 Identities = 119/264 (45%), Positives = 166/264 (62%)

Query: 13  LRRPSLMIGLALVGLLAVLALFGHWIAPHDPDLVDLGQRLQAPDARHWLGTDHLGRDLLS 72
           +R P+++ GL ++  + + ALF  W+AP DP+  ++ QRL  P A HWLGTD LGRDLLS
Sbjct: 32  VRSPAMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPGAAHWLGTDQLGRDLLS 91

Query: 73  RLIVGTRLSLGSVMLTLALVLALGLAVGGVAGFVGGRTDLLLMRLCDMFMTFPTLVLAFF 132
           R+I GTR +L  V L   L   LGL +G  AG+ GG  D LLMR+ D+FM FP LVLA  
Sbjct: 92  RVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLALA 151

Query: 133 FVTLLGTGLSNVIIAIALSHWAWYARMVRGLVIAQRGREYVLASRLAGASRWARLRQHVL 192
            V +LG G+ N +IAIA++ W  YAR+ R      RG +++ A+R+ G      L  H+L
Sbjct: 152 LVAVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHLL 211

Query: 193 PNIAGPLLVLATMDIGHMMLHVSGLSFLGLGVAPPTAEWGVMINDAKEFIWTQPQLLLLP 252
           P      +V  T+D+  ++L  +GL FLGLG  PP +EWG MI+  +++I+ Q  +  +P
Sbjct: 212 PICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAVP 271

Query: 253 GLMIFFSVMAFNLLGDALRDRLDP 276
           G+ I    +AFNL+GD LRD LDP
Sbjct: 272 GVAILLGSLAFNLVGDGLRDVLDP 295