Pairwise Alignments

Query, 281 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 278 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  194 bits (492), Expect = 2e-54
 Identities = 104/258 (40%), Positives = 153/258 (59%)

Query: 19  MIGLALVGLLAVLALFGHWIAPHDPDLVDLGQRLQAPDARHWLGTDHLGRDLLSRLIVGT 78
           +IG+ +VGL+   AL      PHDP  ++ G RL+ P     LGTD  GRD LSRL+ G 
Sbjct: 15  LIGIVIVGLIVAAALVSLVWTPHDPLRINFGARLKLPGGAFLLGTDEFGRDELSRLMAGA 74

Query: 79  RLSLGSVMLTLALVLALGLAVGGVAGFVGGRTDLLLMRLCDMFMTFPTLVLAFFFVTLLG 138
             S+   +LT+   + +G  VG + GF+ G TD ++M   +  + FP L+LA   + ++G
Sbjct: 75  ATSVWIAVLTVGFSIVVGSIVGVLTGFLRGWTDRIVMAFNNALLAFPGLLLALGLLAVVG 134

Query: 139 TGLSNVIIAIALSHWAWYARMVRGLVIAQRGREYVLASRLAGASRWARLRQHVLPNIAGP 198
                +++A+ L++     R+VRG V++ R +E++ +SR+ G S    + +HVLPN   P
Sbjct: 135 ANQYGIVLALGLAYTPSVTRIVRGTVLSLREKEFIESSRVLGNSELYTMVRHVLPNCTAP 194

Query: 199 LLVLATMDIGHMMLHVSGLSFLGLGVAPPTAEWGVMINDAKEFIWTQPQLLLLPGLMIFF 258
           L VLAT   G ++L  S LSFLGLGV PP   WG M+  A+ F+     L +LPGL I  
Sbjct: 195 LTVLATSMFGWVILAESALSFLGLGVPPPAPTWGNMLASARPFMAQASYLSILPGLCIAL 254

Query: 259 SVMAFNLLGDALRDRLDP 276
           +++  NLLGDA+RD LDP
Sbjct: 255 TLLGINLLGDAVRDWLDP 272