Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 337 a.a., Dipeptide transport system permease protein DppB from Xanthobacter sp. DMC5

 Score =  198 bits (504), Expect = 1e-55
 Identities = 120/339 (35%), Positives = 180/339 (53%), Gaps = 33/339 (9%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           ML+ +  RLA  VP ++G  ++ F+L  +   D A  +   +  P    AIAE+R  LGL
Sbjct: 1   MLKLLGSRLATAVPSLIGVVIVTFLLTRVLPGDTAAYFAGPAATPQ---AIAEIRTKLGL 57

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           D+ L AQ+  ++    H D G S  TG+PV  ++   LPA+ +L    L   LL+++P G
Sbjct: 58  DKSLPAQFADYVSALAHGDLGSSLSTGQPVATEIASRLPASAELTLAGLVLALLIAVPFG 117

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLP-PLG---------- 169
           ++AA  QG W DHA R +T  GVS+P F+   LL+ +F   LGW P PLG          
Sbjct: 118 IMAAVRQGSWIDHACRIITTAGVSLPVFFTGLLLVYVFYFKLGWAPAPLGRLDVFFSAPE 177

Query: 170 -------------------RGGAGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTY 210
                              R     L +P + +A+ +++  AR+ RAS+L       V  
Sbjct: 178 TVTGFYLIDSLIARDFETFRAALAQLAVPAITLAIFALAPIARMTRASMLAVLSSEFVRT 237

Query: 211 ARARGLPERHVWRDHILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVL 270
           A+A GL +  V   +  RNA LP+VT  GM    LLG  +++E +FAWPG+G +AV A++
Sbjct: 238 AKAAGLTDYTVIITYAFRNAMLPVVTTLGMVFSFLLGANVLVEKVFAWPGIGSYAVEALI 297

Query: 271 NRDFPVMQCFTLLLTGLLMICNLIVDVCYAWLDPRSRLE 309
             D+  +Q F L +  L +I NL++D+ Y  +DPR+R E
Sbjct: 298 TSDYAPVQGFVLAMAILYVILNLLIDLAYGIIDPRARSE 336