Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  205 bits (522), Expect = 1e-57
 Identities = 114/313 (36%), Positives = 179/313 (57%), Gaps = 11/313 (3%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           M  Y+L R+A+ +P +L  S+ VF L+ L   DP L  L     P   A +A +RH +GL
Sbjct: 1   MFAYLLRRIAMTIPTLLLVSIAVFTLMRLIPGDPVLLMLGEGADP---AQLALMRHQMGL 57

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           D+PL  QYL WL +A+  D G+S   G  VL  +      +  +  +A+A   L+++P G
Sbjct: 58  DQPLPVQYLVWLRHALTGDLGVSTTNGLAVLPLIWERFQVSAVIVLVAVALASLIAVPAG 117

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLG--------RGG 172
           L+AA  + +  D A+     L +S+P+FWL  LL+  F  +LGWLP +G          G
Sbjct: 118 LVAAWRKDKPTDLAIIGAATLMLSVPSFWLGLLLLMFFGQYLGWLPVVGYVPMSENFSQG 177

Query: 173 AGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWL 232
             ++++P+  + L+   +  R+ RAS ++     +VT+ARA+G+PE  V R H+L NA+ 
Sbjct: 178 VLYVILPIATLLLVETGVLTRMSRASTIEILRLEYVTHARAKGVPESQVLRRHVLPNAFN 237

Query: 233 PLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICN 292
           P +T  G+ +G LL G  V+ET+F  PG+GR  + ++  RD+PV+Q   L    + ++ N
Sbjct: 238 PTLTMIGLILGHLLSGIAVLETVFTLPGLGRLMIDSIFARDYPVLQGCLLFTACIYVVIN 297

Query: 293 LIVDVCYAWLDPR 305
           L+VD+CY   DPR
Sbjct: 298 LVVDLCYPLFDPR 310