Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  221 bits (562), Expect = 2e-62
 Identities = 128/335 (38%), Positives = 186/335 (55%), Gaps = 30/335 (8%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           M R+IL R++LLVP  +G +LL F L+ L   DP         I P  A  AE+R   G 
Sbjct: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDP--ARHAELRTAYGF 58

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           D+P+  QY  ++   +H D G S IT   V+ + L   PAT++L   A+   LLL +P G
Sbjct: 59  DKPVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAG 118

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGR---------- 170
           +LAA  +    DH V A +  G SMP FW   LLI  FS+ LGW P  GR          
Sbjct: 119 ILAAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIEPE 178

Query: 171 -----------GGAG-------HLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYAR 212
                      G  G       HL++P + +  + +++ AR+ R+++L+  G+ ++  AR
Sbjct: 179 TGFLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTAR 238

Query: 213 ARGLPERHVWRDHILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNR 272
           A+GL    V   H LRNA +P+VT  G+ +G L  GA++ ETIF+WPGVG++ + A+  R
Sbjct: 239 AKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRR 298

Query: 273 DFPVMQCFTLLLTGLLMICNLIVDVCYAWLDPRSR 307
           D+PV+Q   LLL G++M+ NL+VDV Y  ++PR R
Sbjct: 299 DYPVLQGGMLLLGGIVMLVNLLVDVAYGVINPRIR 333