Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 306 a.a., predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  228 bits (582), Expect = 1e-64
 Identities = 124/308 (40%), Positives = 183/308 (59%), Gaps = 5/308 (1%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAE-VRHTLG 59
           ML Y++ RL  L+P +   S+LVF+ +H+   DPA    RL   P  DA + E VR  LG
Sbjct: 1   MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPA----RLIAGPEADAQVIELVRQQLG 56

Query: 60  LDRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPL 119
           LD+PLY Q+  ++ NAV  DFG+S ++ RPV D++      TL L   ++   ++  +  
Sbjct: 57  LDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAA 116

Query: 120 GLLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGGAGHLVMP 179
           G++AA W+ RWPD     +   G+S P F L  LLI +FS+ LGWLP +G     H ++P
Sbjct: 117 GIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILP 176

Query: 180 VLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTATG 239
            L +     ++ AR  RAS +D   + ++  ARA+G+ E  V   H LRNA +P+VT  G
Sbjct: 177 SLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMG 236

Query: 240 MHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDVCY 299
           +  G LLGG++V+E +F WPG+GR  V +V  RD+PV+Q   LL +   ++ NL+VDV Y
Sbjct: 237 LQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLY 296

Query: 300 AWLDPRSR 307
           A ++P  R
Sbjct: 297 AAINPAIR 304