Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 306 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  222 bits (565), Expect = 1e-62
 Identities = 118/308 (38%), Positives = 183/308 (59%), Gaps = 5/308 (1%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAE-VRHTLG 59
           ML Y+  RL  L+P +L  ++LVF+ +H+   DPA    RL   P  DA + + VR  LG
Sbjct: 1   MLNYVCKRLLGLIPTLLIVAVLVFLFVHMLPGDPA----RLVAGPEADATVIDLVRKQLG 56

Query: 60  LDRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPL 119
           LD+PLY Q++ ++ N +  DFGIS ++ RPV +++      T  L   ++   ++  +  
Sbjct: 57  LDQPLYMQFIHYICNVLQGDFGISMVSRRPVSEEIASRFMPTFWLTIASMCWAVVFGLGA 116

Query: 120 GLLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGGAGHLVMP 179
           G++AA W+ RWPD    A+   G+S P F L  LL+ +FS+ LGWLP +G     H ++P
Sbjct: 117 GIIAAVWRNRWPDKLGMALAVTGISFPAFALGMLLMQIFSVELGWLPTVGADTWKHYILP 176

Query: 180 VLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTATG 239
            + +     ++ AR  RAS +D   + ++  ARA+G+ E+ V   H  RNA +P+VT  G
Sbjct: 177 SMTLGAAVSAVMARFTRASFVDVLSEDYIRTARAKGVSEKWVILKHGFRNAMIPVVTMMG 236

Query: 240 MHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDVCY 299
           +  G LLGG++V+E +F WPG+GR  V +V  RD+PV+Q   LL +   ++ NL+VDV Y
Sbjct: 237 LQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEVLLFSLEFILINLVVDVLY 296

Query: 300 AWLDPRSR 307
           A ++P  R
Sbjct: 297 AAINPAIR 304