Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dianthicola ME23

 Score =  206 bits (524), Expect = 6e-58
 Identities = 117/338 (34%), Positives = 187/338 (55%), Gaps = 33/338 (9%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           ML++IL RL L++P  +G +LL F  +HL   DP +       I P   A  ++   LGL
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHA--QLMAELGL 58

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           D+PL+ QYL ++   +H D G+S  +  PV D+ +    ATL+LG  A+   +++ IP+G
Sbjct: 59  DKPLWDQYLHYINGVLHGDLGMSLKSRIPVWDEFVPRFKATLELGVCAMIFAVIVGIPVG 118

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGG-------- 172
           +LAA  +G   DH   ++   G SMP FW   +LI L S+ L   P  GR G        
Sbjct: 119 VLAAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDA 178

Query: 173 -----------------------AGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVT 209
                                    H+V+P + +  + +++  R+ R+++L+  G+ ++ 
Sbjct: 179 LPLSGFMLIDTLIWGADGDFKDAVMHMVLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIR 238

Query: 210 YARARGLPERHVWRDHILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAV 269
            ARA+GL    V   H LRNA LP+VT  G+ +G +L GA++ ETIF+WPG+GR+ + A+
Sbjct: 239 TARAKGLSRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDAL 298

Query: 270 LNRDFPVMQCFTLLLTGLLMICNLIVDVCYAWLDPRSR 307
             RD+PV+Q   LL+  ++++ NL+VD+ Y  ++PR R
Sbjct: 299 QRRDYPVVQSGVLLVATMIILVNLLVDLLYGVVNPRIR 336