Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

 Score =  192 bits (488), Expect = 9e-54
 Identities = 118/309 (38%), Positives = 172/309 (55%), Gaps = 4/309 (1%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           M+ +IL RL   + VM+     VF++L LG  DPA   L  +  P    A+A  R   GL
Sbjct: 1   MISFILARLVRAIIVMMLTVTFVFIILRLGG-DPARAMLGENATPE---ALAAFRTAWGL 56

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           DR +  Q+L +L +A+  DFG+S   GR V   +   +P TL L   A   ++L+ IP G
Sbjct: 57  DRSIPEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAG 116

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGGAGHLVMPV 180
           ++AA  +    D +V A   LG S+PNF L   LI +F++W   LP  G     H ++PV
Sbjct: 117 IIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHAILPV 176

Query: 181 LAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTATGM 240
               L++ +  AR  R++L++   Q ++  ARA G+P+  V   H L NA +P+VT  G 
Sbjct: 177 ATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGF 236

Query: 241 HIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDVCYA 300
               LLGG+ ++ET+FAWPG+G   V A+   D  V+Q   LL T  ++  NLIVDV YA
Sbjct: 237 VAAGLLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYA 296

Query: 301 WLDPRSRLE 309
            L+P+ RL+
Sbjct: 297 VLNPKIRLQ 305