Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  200 bits (509), Expect = 3e-56
 Identities = 115/323 (35%), Positives = 185/323 (57%), Gaps = 20/323 (6%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           ML +I+ RL   V VML  +L+ F++  L   DP ++ +        D A   +R  LGL
Sbjct: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAG-DP-VELMVGEQTSQEDRAA--LRERLGL 56

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           +  L  QYL ++ +A   +FG+SY  G+ VL  +    PATL+L  +A   +L++ +PLG
Sbjct: 57  NDSLPTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLG 116

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRG--------- 171
           +L A  +G+W    ++ ++ +GVS+P+F +  LLI +FS+ LGW P  GRG         
Sbjct: 117 VLTAIRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWS 176

Query: 172 -------GAGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRD 224
                  G   L++P +A++L  +++  RL+RA +L+      V +ARARG+P   ++  
Sbjct: 177 TGLLTSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFR 236

Query: 225 HILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLL 284
           H LRN  +P+VT T M++G L+  AL+ ET+F WPG+G   + AV   D PVM  +  ++
Sbjct: 237 HALRNCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCII 296

Query: 285 TGLLMICNLIVDVCYAWLDPRSR 307
           + + ++ N  VD+ YA +DPR R
Sbjct: 297 SFIFVVLNTFVDIAYAVIDPRLR 319