Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  209 bits (532), Expect = 7e-59
 Identities = 114/335 (34%), Positives = 184/335 (54%), Gaps = 30/335 (8%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           M+R+I  +L  LVP  LG +++ F  + +   DP L       I P   A  ++   LG 
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMAGERGISPERHA--QLAEQLGF 58

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
            +P++ QYL +L   +  D G S +T +PVL + L   PAT++LG +A+    ++ +P+G
Sbjct: 59  AQPIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFPATVELGLVAIIIATVIGVPVG 118

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGR---------- 170
           ++AA  +G W D        +G SMP FW   LLI +FS  L W P  GR          
Sbjct: 119 VIAAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFSGILQWTPVSGRISLMYFFPSV 178

Query: 171 ------------------GGAGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYAR 212
                                 HL++P + +A + +++ AR  R+++L+  G+ +V  AR
Sbjct: 179 TGFMLIDSLISGQKGAFASALSHLILPSVVLATIPLAVIARQTRSAMLEVLGEDYVRTAR 238

Query: 213 ARGLPERHVWRDHILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNR 272
           A+G+    V   H LRNA +P++T  G+ IG L+ GA++ ETIF+WPG+G++ + ++  R
Sbjct: 239 AKGMSASRVVGIHALRNAMIPVITTIGLQIGVLMAGAILTETIFSWPGIGKWMIDSISRR 298

Query: 273 DFPVMQCFTLLLTGLLMICNLIVDVCYAWLDPRSR 307
           D+PV+Q   LL+ GL+M+ NL+VD+ Y  ++PR R
Sbjct: 299 DYPVVQSGLLLIAGLVMVVNLLVDLTYGLINPRIR 333