Pairwise Alignments

Query, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  367 bits (943), Expect = e-105
 Identities = 190/440 (43%), Positives = 285/440 (64%), Gaps = 1/440 (0%)

Query: 294  DISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDLDGFKS 353
            D+S +K  E ++   A HD LT L NR    +RL  A + ++++  ++ V++IDLD FK+
Sbjct: 610  DVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFKN 669

Query: 354  INDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPVAERLL 413
            INDS+GH+ GD +L  VA R++Q VRP DTV R+GGDEFVV+L ++   ++ + + ER L
Sbjct: 670  INDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQEILSLVERRL 729

Query: 414  AS-IGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRNNFQWYTS 472
             S I +P+ I G ++HVS S+GI V     +    L++ AD+AMY++K  GR+  +++T 
Sbjct: 730  ISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTP 789

Query: 473  DLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPA 532
            ++N R  +   L + L+ AI+    SLHYQP+I+A +  ++ +EALLRW+    G + PA
Sbjct: 790  EMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVRPA 849

Query: 533  VFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQA 592
             FIP+AE+SGQI+ +  WV++ ACAQ       G   I +A+N+S +  + G  +E ++ 
Sbjct: 850  QFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLRDGGLLEVLRG 909

Query: 593  VLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCL 652
             ++ +G+S G LE+E+TES L+   EQ++  LH LK LGV +++DDFGTG+SSL+YL   
Sbjct: 910  AIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYLNRF 969

Query: 653  PIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDI 712
            PIDK+KIDRSFI  +  +P D AI + II + H L L VVAEGVE   + + L   RCD 
Sbjct: 970  PIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAARCDE 1029

Query: 713  LQGYYFARPMSHEALRTFLA 732
            LQGY  +RPM    L  ++A
Sbjct: 1030 LQGYLISRPMPAGKLAGWIA 1049