Pairwise Alignments

Query, 327 a.a., Membrane protein, TerC family from Pseudomonas putida KT2440

Subject, 326 a.a., Integral membrane protein TerC from Sphingobium sp. HT1-2

 Score =  392 bits (1007), Expect = e-114
 Identities = 198/322 (61%), Positives = 253/322 (78%), Gaps = 6/322 (1%)

Query: 7   YLYQDVLGTDLWLWLSFFAVVLTLLALDLGVLHRGNREIGVKESLLLSAGYISMGLLFAV 66
           +L+ D LG  LWLWLSF  +V+ +LA+DLG++HR ++EIGV ESL+ SA YI +GL F  
Sbjct: 3   FLFVDWLGKPLWLWLSFLGIVIVMLAVDLGIVHRKSKEIGVTESLVTSAAYILLGLAFGG 62

Query: 67  WVYFQKGSDASMDYVTGFLIEKSLSMDNVFVIALIFSFLAIPREFQHRVLFWGIMGVIVL 126
           WV++  G+ A M+Y+TGF++EKSL+MDNVFVIA+IF++ A+PR +QHRVLFWGI+GVIVL
Sbjct: 63  WVWWYMGATAGMNYLTGFVVEKSLAMDNVFVIAMIFTYFAVPRLYQHRVLFWGILGVIVL 122

Query: 127 RAIMIGLGAALIAQFSWILYCFGAFLVFTGVKM-LFARVDHAPDLENNRFVNYLRTHLRI 185
           RAIMIG+GA L+ QFSW+LY F AFL+FTGVKM LFA  D   D+  N  + ++R H R+
Sbjct: 123 RAIMIGVGATLVEQFSWVLYVFAAFLIFTGVKMWLFA--DKEYDVAANPVLKFVRRHFRV 180

Query: 186 TKELHAQRFVIRLPD-ASGKRILWVTPLFLALILIECADLVFAVDSVPAIFAITQDPFIV 244
           T  LH + F ++  D A+GK+  ++TPL LAL+++E  D+VFAVDSVPAIFAIT DPFIV
Sbjct: 181 TDRLHGEHFWVKQADPATGKQAWFMTPLMLALLMVEIVDVVFAVDSVPAIFAITTDPFIV 240

Query: 245 YTSNIFAILGLRALYFALAAMISRFVYLKYALALVLVFIGSKIFLHDIVG--KVPAEISL 302
           YTSNIFAILGLRALYFALAAM+ RF YLKYALA++LVFIGSKIF+ D +G  K+P   SL
Sbjct: 241 YTSNIFAILGLRALYFALAAMVDRFHYLKYALAILLVFIGSKIFVADALGLAKIPPVASL 300

Query: 303 SITIGLLIGGVLLSLWKTRASA 324
           S+T  +L  G+  SLWKTR  A
Sbjct: 301 SVTFAILAAGIGWSLWKTRDQA 322