Pairwise Alignments

Query, 412 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

Subject, 400 a.a., Bicyclomycin resistance protein from Azospirillum sp. SherDot2

 Score =  182 bits (463), Expect = 1e-50
 Identities = 128/360 (35%), Positives = 190/360 (52%), Gaps = 14/360 (3%)

Query: 18  RANVLTAKVILLLAALAAISNLSTNIILPAFPEMARQLNVSSQELGLTLSSFFITFAFAQ 77
           R + LT ++  LL AL A   LST++ LP+ P + R        + LTLS F + FA +Q
Sbjct: 3   RPDSLTIRI--LLTALVAFGPLSTDLYLPSLPTLVRVFGTDVATVQLTLSIFLVGFAVSQ 60

Query: 78  LLVGPLADRYGRKRLVVGGLMIFVVGTFWAANAATLDMLILGRVIQAIGVCAAAVLARAI 137
           L+ GP++DR+GR+  ++ G+ I++  +   A  +++D LI  R  QA+G C   V+ARA+
Sbjct: 61  LVYGPMSDRFGRRPTLLVGVTIYLAASAVCAMTSSIDALIAARFFQALGACCGPVVARAV 120

Query: 138 ARDLYEGENLARALSLTMIAAATAPGFSPLIGSMLNTTLGWRALFIAVGMSA--ILIALF 195
            RD++  +  A  L+   +A A AP   P++G +L    GWRA F+ + + A  IL A++
Sbjct: 121 VRDVFGRDRAATVLAYMSMAMALAPAVGPMLGGVLTEWFGWRANFVLLTVFACGILAAVW 180

Query: 196 YLRGIGETLPAHRRVTQSVPAILIA-YGKLASNRLFILPALATSLLMSGLFASFAAAPSI 254
            L  +GET  AHR      P+ L A Y  L  NR F+   L  +   SG+F+  + +  +
Sbjct: 181 SL--LGET-NAHRDEDALRPSRLAANYLLLLRNRGFLGYVLVVAFSYSGIFSFISGSSFV 237

Query: 255 LMEGMGLSSLQVGLYFAATV----FVVFAAGLAAPRLAHRWGSRAITLSGLATACTAGAL 310
           L+E M L+  Q G  F A V       F AG   PRL      R  TL  +      GAL
Sbjct: 238 LIEQMHLTPAQYGASFGAVVLGYMLGTFLAGRLTPRLGGARMIRIGTLLSMGGGLVGGAL 297

Query: 311 LLVGPSNPSLGWYSLSMVLFLWGMGIANPLGTALTMTPFGKEAGLASALLGFLTMAIGAV 370
            L G  +  L    + + LF+ G G+  P  +A  + P+   AGLAS+LLGF  MAI A+
Sbjct: 298 ALAGVLH--LLAIVVPVFLFILGTGLTLPNASANAVGPYATMAGLASSLLGFAQMAIAAI 355



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 41/243 (16%)

Query: 6   ETHANEAEGDAQRANVLTAKVILLL----------AALAAISNLSTNIILPAFPEMARQL 55
           ET+A+  E DA R + L A  +LLL              + S + + I   +F  +  Q+
Sbjct: 185 ETNAHRDE-DALRPSRLAANYLLLLRNRGFLGYVLVVAFSYSGIFSFISGSSFV-LIEQM 242

Query: 56  NVSSQELGLTLSSFFITFAFAQLLVGPLADRYGRKRLVVGGLMIFVVGTFWAANAATLDM 115
           +++  + G +  +  + +     L G L  R G  R++  G ++ + G       A   +
Sbjct: 243 HLTPAQYGASFGAVVLGYMLGTFLAGRLTPRLGGARMIRIGTLLSMGGGLVGGALALAGV 302

Query: 116 LILGRVIQAIGVCAAAVLARAIARDLYEGENLARALSLTMIAAATAPGFSPLIGSMLNTT 175
           L L  ++  + +                   L   L+L   A+A A G    +  + ++ 
Sbjct: 303 LHLLAIVVPVFLFI-----------------LGTGLTLPN-ASANAVGPYATMAGLASSL 344

Query: 176 LGWRALFIAVGMSAILIALFYLRGIGETLPAHRRVTQSVPAILIAYGKLASNRLFILPAL 235
           LG+  + IA    AI+  +      G  LP    +       L+A G L ++RL ++PA 
Sbjct: 345 LGFAQMAIA----AIIGIVVGHMNDGTALPMMGAIG------LVALGALLAHRLLVIPA- 393

Query: 236 ATS 238
           ATS
Sbjct: 394 ATS 396