Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1049 a.a., Nickel and cobalt resistance protein CnrA from Xanthobacter sp. DMC5

 Score =  973 bits (2514), Expect = 0.0
 Identities = 492/1022 (48%), Positives = 702/1022 (68%), Gaps = 1/1022 (0%)

Query: 5    RFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEM 64
            RFNLS  A+  R++TLF I+L+  AG  ++F LGRAEDP FT+K M +  AWPGATA EM
Sbjct: 23   RFNLSRWAITHRALTLFAILLLGAAGAYSYFNLGRAEDPSFTIKVMVVQAAWPGATASEM 82

Query: 65   QDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQA 124
            Q  VA+P+EK++Q L   DR E+Y+RPG++F  V L+D TP   V++ +YQ RKK  D  
Sbjct: 83   QAQVADPIEKKLQSLPHLDRVESYSRPGVSFVQVFLRDNTPAKEVKDLWYQVRKKVSDVR 142

Query: 125  KLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIG 184
              +PAGVIGP  +DE+ DV  A+Y L  +G    +L R AE +RQ+LL VP V+KV++IG
Sbjct: 143  GDLPAGVIGPGFDDEYGDVYSALYILSGQGAAPAELKRQAELIRQRLLRVPNVEKVDLIG 202

Query: 185  EQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLA 244
            E+ E+I++ FSH RLA LGITPQ +F ++  QNA+   G+V+T+  ++ +RV GAF  + 
Sbjct: 203  ERPEKIYIEFSHARLANLGITPQQVFDSVARQNAVVAGGAVDTRSDRINLRVTGAFTGVE 262

Query: 245  KIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGKA 304
             I E PV   G  L+L D+A V+RGYEDP  FL+R  G PAL +G+ M +G N L LG+ 
Sbjct: 263  AIAEVPVAVNGALLRLGDIATVKRGYEDPPAFLMRQHGLPALGIGVSMAQGANILTLGEG 322

Query: 305  LEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVGV 364
            L+   A+    +P G+ +++V DQ   +  SV EF+  F  AL++V++V FLS+G+R G+
Sbjct: 323  LKTAMAEATAELPHGIDVTQVADQPHIVGESVGEFLKTFLEALVIVLVVSFLSLGFRTGI 382

Query: 365  VVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDR 424
            VVA +VPL LAIVF++M + G +  RITLG+LI+ALGLLVDDAIIAIEMMVVKMEEG+DR
Sbjct: 383  VVALSVPLVLAIVFLIMFSAGMDLHRITLGALIIALGLLVDDAIIAIEMMVVKMEEGWDR 442

Query: 425  IKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVA 484
            + A+ +AW+ TA PML+GTLVTA GF+P GFA+S++GEY   +FW+VGIALIASW VAV 
Sbjct: 443  MSAATFAWTSTAFPMLTGTLVTAAGFLPVGFAKSSSGEYAGGIFWVVGIALIASWFVAVI 502

Query: 485  FTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVAAVLG 544
            FTPYLG  LLP +K   GGH  +++ R Y   R  L + + H+++V GT V  F  +V+ 
Sbjct: 503  FTPYLGTVLLPDMKK-AGGHHEMHDGRLYRMLRGTLEFCLRHRFMVIGTTVVMFAGSVVA 561

Query: 545  MGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQGP 604
             G V++QFFPTS RPE+ +E+++P GTSI  T ATA K E+ + +  +    TTY+G+G 
Sbjct: 562  FGFVQQQFFPTSTRPELFLEIRLPEGTSITVTEATAKKAEALVGEDPDVATSTTYVGRGA 621

Query: 605  PRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGPY 664
            PRF+L + P LP+P+FA+IV++ ++  ARE LK RL    +EG    A+VRV + VFGP 
Sbjct: 622  PRFWLGLNPVLPNPNFAQIVIVAKDVAARERLKARLDAELAEGALSEARVRVDRFVFGPP 681

Query: 665  SPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQSV 724
              +PV +RV+GPD   +R IA +V+ V+ +   M   + +WG  V ++  +++QDR +++
Sbjct: 682  VGFPVQFRVVGPDPIAVRDIAEKVRLVMASDTDMIDPHLNWGEQVKSITLTVDQDRARAL 741

Query: 725  GLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQRV 784
            G +   +++ LQ LL G  IT +RE    + V+ RA  + R+D   +   T+   NG  V
Sbjct: 742  GTSPRDIAETLQTLLQGYAITQLREGNLLIDVMARAVPEERVDLEHLAALTVTTRNGLAV 801

Query: 785  PVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPAGY 844
            P+ Q+  +    E+PIL RRDR   +TVRGD+ +G+QPPDV+T +   L  +  +LP GY
Sbjct: 802  PLGQVARIGYAHEEPILWRRDRDLVLTVRGDVRDGVQPPDVTTRLLPKLAQLKAELPPGY 861

Query: 845  KIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVPV 904
            +IE  GSIEESAKA+ ++  + P+MI + L ++++Q++S S + +V  T+PLGLIG    
Sbjct: 862  RIETGGSIEESAKANASLAAVFPVMIIVMLTLLMIQLQSFSRLALVLATAPLGLIGAAAA 921

Query: 905  LLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPVL 964
            LL+  +PFG  AL+GLIAL+G++MRNT+IL+ QIDH+  +G  P  A+VEAT++RARPV+
Sbjct: 922  LLIAHRPFGFVALLGLIALAGMIMRNTVILVDQIDHDIRDGATPHRAIVEATLRRARPVV 981

Query: 965  LTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNSRIAKP 1024
            LTALAA+L  IPL  SVFWG +A T++GG  V T++TL+ +PA+Y+ WF+++       P
Sbjct: 982  LTALAAVLGMIPLAESVFWGPMAVTIMGGLLVATVLTLLVVPALYATWFRVKVTEEETAP 1041

Query: 1025 EA 1026
             A
Sbjct: 1042 AA 1043