Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

 Score =  747 bits (1929), Expect = 0.0
 Identities = 394/1014 (38%), Positives = 607/1014 (59%), Gaps = 11/1014 (1%)

Query: 6    FNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQ 65
            FNLS  A++ +S   +L+ +    G  ++  LGR EDP FT+K M I T WPGAT +E  
Sbjct: 5    FNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETL 64

Query: 66   DLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAK 125
              V + +EK+++EL   D  ++YTRPG +   V L+D T   A+ E +YQ RKK  D   
Sbjct: 65   KQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIRG 124

Query: 126  LMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIGE 185
              P G+ GP  NDEF DV  +VYA    G   RQL    E +R ++  VPG+ KV +IG+
Sbjct: 125  TFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIGQ 184

Query: 186  QAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLAK 245
            Q E I+++FS  +LA LGI  + +  +L +QNA++P+G +E    ++ VR  G F     
Sbjct: 185  QDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKD 244

Query: 246  IRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGKAL 305
            +    +    R  +L+D+AD+ RGY DPA  + R +G+PA+ L I M++G N    GKAL
Sbjct: 245  LANVNLRLNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKAL 304

Query: 306  EAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVGVV 365
                 ++   +P+G+ + KV+DQA  +  +V  F    F A+++V++V F+S+G R G+V
Sbjct: 305  HERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGLV 364

Query: 366  VAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 425
            VA ++PL LA+VFV M  +G    R++LG+LI+ALGLLVDDA+I +EMM+ ++E+G  + 
Sbjct: 365  VACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETKE 424

Query: 426  KASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVAF 485
            +A+ YA++ TA PML+GTLVT  GF+P G   S+AGEYT  +F ++ +A++ SWVVAV F
Sbjct: 425  QAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVLF 484

Query: 486  TPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLG---WVIAHKWLVAGTVVSTFVAAV 542
             P +GV +L         +   +N       RA  G   W + ++W   G  V+ FVA+V
Sbjct: 485  APVIGVHIL-------SANVKPHNAEPGRIGRAFNGGMLWAMRNRWWAIGITVALFVASV 537

Query: 543  LGMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQ 602
              M  V+ QFFP+SDRPE+LV+L +P   SI +T     ++E+ ++   +    +TYIGQ
Sbjct: 538  FSMQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQ 597

Query: 603  GPPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFG 662
            G  RF+L +  +L +P +A++V++++    R  L  RL++   +    G    V  L  G
Sbjct: 598  GAIRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFV-GIGSYVQPLEMG 656

Query: 663  PYSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQ 722
            P    P+ YRV G D  Q+R+ A  + ++L  +  +  +  DW      L   + QD+ +
Sbjct: 657  PPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKAR 716

Query: 723  SVGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQ 782
             +GL+S  V+Q +  +++G  +T V +DI  + VVGRA    R  P  ++N  +V  NG 
Sbjct: 717  QLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNGT 776

Query: 783  RVPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPA 842
             +P+     V   +E P++ RRDR PT+T++  + + +QP D+   +  ++      LP 
Sbjct: 777  SIPLLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAGLPV 836

Query: 843  GYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVV 902
            GYK+   G++EES KA   I  ++P+M+ L    +++Q+ S+  M +V   +PLGLIGVV
Sbjct: 837  GYKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVV 896

Query: 903  PVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARP 962
              L+  G P G  A++G++AL GI++RN++IL+ QI   ++ G  P+DAVVEAT  R RP
Sbjct: 897  LALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRP 956

Query: 963  VLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIR 1016
            +LLTA AA L  IP+   VFWG +AY +IGG  + T++TL+FLPA+Y  W+KIR
Sbjct: 957  ILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIR 1010