Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1061 a.a., acriflavin resistance protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  290 bits (742), Expect = 4e-82
 Identities = 238/1030 (23%), Positives = 465/1030 (45%), Gaps = 31/1030 (3%)

Query: 7    NLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQD 66
            N++ ++++  +I + +  ++   G  ++F L     P F+   +T+ T +PGA+  E+++
Sbjct: 2    NITKISIQRSTIVVVIFAILTLLGLASYFSLNYELLPKFSPPVLTVSTFYPGASPSEVEN 61

Query: 67   LVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAKL 126
             V + +E  +  L   D  ++ ++   +  ++ L+  T    V +    A++K       
Sbjct: 62   SVTKEIEDALSSLENVDEVKSTSQESFSVIVIQLKQGTD---VDQSLQDAQRKINAILGE 118

Query: 127  MPAGVIGPMLND-EFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIGE 185
            +P     P L   +FSD+        AK  P          ++ +L  VPG+ ++ ++G 
Sbjct: 119  LPEDADPPSLGKFDFSDMPIMQVGATAKMSPTAFYDLIENKVKPELSRVPGMAQIKVLGG 178

Query: 186  QAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLAK 245
            Q   I V+   DRL   G++   +   +   N   P+G V+ +  Q ++R+ G ++ + +
Sbjct: 179  QEREIKVNLDADRLQAYGLSISQVQQKIQYSNLDFPTGKVKNEEGQTLIRLAGKYETVDQ 238

Query: 246  IRETPVV--AQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGK 303
            +R   +   A G  ++LSDVA+V+   +D    L R +   ++ L I  +   N +++ +
Sbjct: 239  LRNLVLKEDATGASVRLSDVAEVQDAQKD-VEVLTRVNSLSSIGLSIQKQSDANAVEVSE 297

Query: 304  ALEAETAKINEGMPL-GMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSM-GWR 361
                   ++ E     G++ +   D +     + D  +   F+A+++V +V  L +   R
Sbjct: 298  LTRKALDQLEETYAAEGLSFTVAKDSSEFTLEAADAVIHDLFLAIVLVAVVMLLFLHSLR 357

Query: 362  VGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEG 421
              V+V  ++P +L   F+ M   G + + +TL  L L +G+LVDDAI+ IE +   ME G
Sbjct: 358  NAVIVMISIPASLIATFIAMNLLGYSLNLMTLLGLSLVVGILVDDAIVVIENIYRHMEMG 417

Query: 422  YDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVV 481
                +A+        A + S TLV  + F+P   +     +       +V I+ + S  V
Sbjct: 418  KKPAQAAYDGIREIMATVTSITLVIVVVFVPIALSTGLVSDILRQFSVVVAISTMLSLFV 477

Query: 482  AVAFTPYLGVKLLPRIKTIEG----GHAAIYNTRHYNR----FRALLGWVIAHKWLVAGT 533
            A    P L  +   R++ +      G   +   R  +R    F A L W   HK++    
Sbjct: 478  AFTLIPLLASRF-SRLEHLSDKNFFGRFILSFERFLDRVIDGFTAALKWAFNHKFITMAA 536

Query: 534  VVSTFVA--AVLGMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQE 591
             V   VA  A++  G +  +F    DR E +V+L++P   ++EQTN  A +VE +L Q  
Sbjct: 537  TVVLLVASIALVPAGFIGSEFVSAGDRGEFIVQLELPKNATVEQTNFAARQVEGYLEQYP 596

Query: 592  EAKIVTTYIGQGPPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPG 651
            E   + T +G             + + +  ++V  TE   +  A    ++    E + PG
Sbjct: 597  EVTNLFTTVGTTSSAQAGQNTAYMAEVN-VQLVDATERVLSTNAFSREMKVGLEETI-PG 654

Query: 652  AQVRVTQL-VFGPYSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVP 710
             ++ +  + + G  +  P+   + G +   L   + RV + ++       V        P
Sbjct: 655  VKITMVPVSMVGGGNQSPIQVIMTGSNLDTLMAFSDRVMAEVEQVQGTAEVKKSVEDGNP 714

Query: 711  TLHFSLNQDRLQSVGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQ 770
             +  S+++D++ S+GL+   V   +Q   +G      R   R   +  R     R + A 
Sbjct: 715  EIAVSVDRDKMASLGLSLEQVGAGMQTAFSGNTNAQFRGSERDYDINIRLDDFDRRNTAD 774

Query: 771  IENFTLVGSNGQRVPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIW 830
            I N     + G+++ +SQ  ++        L R+DR  +++V   +  G     V T I 
Sbjct: 775  IGNLAFTNNKGEQIRLSQFANIEQSSGPSKLERKDRVSSVSVNSQVI-GRPTGSVGTEIQ 833

Query: 831  KDLQPIVTQLPAGYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMV 890
            + L  + T  P G  I   G ++  ++    +   L   I    LI++    S    ++V
Sbjct: 834  ERLANMDT--PNGVSIAYGGDLKNQSEGFGTLGLALMASIVFVYLIMVALYDSYVYPLVV 891

Query: 891  FLTSPLGLIGVVPVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFD 950
              + PL +IG +  L L      I +++G+I L G++ +N ++++   ++ + EG+   +
Sbjct: 892  LFSIPLAIIGALLALALSASTLSIFSILGIIMLIGLVAKNAIMVVDFTNNLKSEGVEVKE 951

Query: 951  AVVEATVQRARPVLLTALAAILAFIPLTHSVFWGT-----LAYTLIGGTFVGTIMTLVFL 1005
            A++EA   R RP+L+T LA ++  +P+  +   G      LA+ LIGG      +TL+ +
Sbjct: 952  ALIEAVRIRFRPILMTTLAMVIGMLPIALASGPGAEWKNGLAWALIGGLSSSMFLTLIVV 1011

Query: 1006 PAMYSIWFKI 1015
            P +Y ++ +I
Sbjct: 1012 PVIYYLFDRI 1021