Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1036 a.a., cation efflux system protein from Agrobacterium fabrum C58

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 660/1024 (64%), Positives = 828/1024 (80%)

Query: 4    LRFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQE 63
            + FNLSALAVRER++TLF IVL+A AG  AF KLGRAEDP FT+K +T+ + WPGATA+E
Sbjct: 1    MSFNLSALAVRERAVTLFFIVLLAAAGVYAFIKLGRAEDPSFTIKTLTVTSVWPGATARE 60

Query: 64   MQDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQ 123
            MQDLVAEPLEKR+QEL WYDR ET TRPG AF  V+L+D TP SAV+ EFYQARKK GD+
Sbjct: 61   MQDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLRDDTPASAVEGEFYQARKKLGDE 120

Query: 124  AKLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNII 183
            A+ +P GVIGP +NDE+SDV+FA+YALKAKG   R+LVR AET+RQ +LHVPGVKK+NI+
Sbjct: 121  ARNLPPGVIGPFVNDEYSDVSFALYALKAKGMAMRELVRQAETIRQDMLHVPGVKKINIL 180

Query: 184  GEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQL 243
            GEQ E+IFV FS+ +LATLGI+ QDI SAL  +N ++P+GS++TQGPQV +R DGA+D +
Sbjct: 181  GEQPEQIFVEFSYSKLATLGISAQDIASALQRRNTVTPAGSIDTQGPQVFIRFDGAYDSV 240

Query: 244  AKIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGK 303
              I +TP+VA GR LKLSD A+V RGY+DPAT+L+R+DGEPA++LG+VM++GWNGL+LGK
Sbjct: 241  ESIADTPIVAAGRVLKLSDFAEVRRGYQDPATYLIRHDGEPAIMLGVVMQQGWNGLELGK 300

Query: 304  ALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVG 363
            ALE  ++ I + +PLG+TL+KV+DQAVNI  +V EFM+KF +AL VV+ V  +++GWRVG
Sbjct: 301  ALEERSSTIAQTLPLGVTLAKVSDQAVNIDEAVGEFMLKFAMALGVVLFVSLIALGWRVG 360

Query: 364  VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYD 423
            +VVA AVPLTLA+VF++M  TG+ FDRITLG+LILALGLLVDDAIIAIE+MVVKMEEG D
Sbjct: 361  IVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMD 420

Query: 424  RIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAV 483
            RIKA+AYAWSHTAAPMLSGTLVT IG MP GFA+S+AGEY  N+FW+VG ALI SW+VAV
Sbjct: 421  RIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFAKSSAGEYAGNIFWVVGFALIVSWIVAV 480

Query: 484  AFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVAAVL 543
             FTPYLGVK+LP IK +EGGH AIYNT +Y R R+L+ + + HK+L  G V      +V+
Sbjct: 481  TFTPYLGVKMLPEIKPVEGGHHAIYNTPNYRRLRSLIEFAVRHKFLTCGLVGVIMAVSVV 540

Query: 544  GMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQG 603
            GMG VK+QFFPTSDRPEVLVE++MP G SIE T AT  K+E WL++Q E KI T+YIGQG
Sbjct: 541  GMGSVKQQFFPTSDRPEVLVEVRMPEGASIETTTATVKKLEGWLKEQPETKIATSYIGQG 600

Query: 604  PPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGP 663
             PRFF AMAPELP+P+FAKIV LT +  ARE LKHRLREA + GLAP A VRVTQLVFGP
Sbjct: 601  APRFFFAMAPELPNPAFAKIVALTPDAHAREELKHRLREAIASGLAPEASVRVTQLVFGP 660

Query: 664  YSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQS 723
            Y+P+PV +R+ GPD  QL +I+    S++++ P ++  N DWG   P L F  +QDRL  
Sbjct: 661  YTPFPVEFRITGPDPDQLYKISDEALSIMRSVPDVRQPNRDWGNRTPVLRFIPDQDRLNL 720

Query: 724  VGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQR 783
            +GL+ A  +QQ+Q LL+GVPIT VRE+IR+V V+ R+AG+ RLDP+++ +F+L+  +G+ 
Sbjct: 721  IGLSPAEAAQQMQLLLSGVPITQVRENIRNVPVIARSAGENRLDPSRLSDFSLMSRSGRP 780

Query: 784  VPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPAG 843
            VP+ QIG   IR E+PI++RRDRTP +T+R DI E  QPP+VS  ++K LQP++  LPAG
Sbjct: 781  VPLDQIGHSEIRFEEPIMKRRDRTPVITIRSDINEATQPPEVSQQVFKALQPLIASLPAG 840

Query: 844  YKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVP 903
            Y+IEM G+IEES KA+ A+V + P+M+A  L++IILQVRS+S M MV LT+PLGL G VP
Sbjct: 841  YRIEMGGNIEESLKANTALVKIFPLMVAAMLIVIILQVRSLSTMTMVMLTAPLGLAGAVP 900

Query: 904  VLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPV 963
            +LL+F QPFG NA++GLI L+GILMRNTLIL  QI  NQ  GL  + AV+EATVQR RPV
Sbjct: 901  MLLIFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENQAAGLDDYHAVIEATVQRTRPV 960

Query: 964  LLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNSRIAK 1023
            +LTALAA+LAFIPLTHSVFWG++AYTLIGGT VGTIM L+FLPA+Y+ WF+I+P    A 
Sbjct: 961  ILTALAAVLAFIPLTHSVFWGSMAYTLIGGTAVGTIMILLFLPALYAAWFRIKPPRSEAL 1020

Query: 1024 PEAA 1027
            P AA
Sbjct: 1021 PVAA 1024