Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 13/318 (4%)

Query: 51  FSGVVVARTQSDLGFRVSGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAA 110
           + G VV   + ++  +VSG I +  V+ GQ V +GQ L  +D           Q  + +A
Sbjct: 53  YPGTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSA 112

Query: 111 RARAKQTGDDEARYRGLVADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAV 170
           +A  ++   D ARY  L    A++    D  KA    A++Q+S+A+AQ         Y+V
Sbjct: 113 KANLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSV 172

Query: 171 LLADADGVVMDTLAEPGQVVSAGQAVVRLARAGQREAVVYLPETL-----------RPAP 219
           + A   G V  +    G  VSAGQ+++    +     V ++                  P
Sbjct: 173 ITAPFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDVRRFSKMMKNESLP 232

Query: 220 GSTALATLFGKPAQAVPAKLRLLSDAADPITRTFEARYVLTGPLASAPLGATITLEIPDT 279
            ST               +L  +  A    + T   R     P      G T+ L + + 
Sbjct: 233 DSTFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPGMTLNLRVLNQ 292

Query: 280 DTDFEAKQIPIGALFDPGNGAGVWVIAGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRI 339
           D   +   IP  A+ +      V+V+ G  + V  + V++ +    + VV+  L  G +I
Sbjct: 293 DIG-DQIAIPFKAVTEQMGEYFVYVV-GDDSVVHQQNVQLGTKVGAEIVVREGLKPGQKI 350

Query: 340 VALGAHLLRDGVEVMEQA 357
           V  G   LR+G +V   A
Sbjct: 351 VVEGIQKLREGAKVQIDA 368