Pairwise Alignments

Query, 487 a.a., Outer membrane lipoprotein from Pseudomonas putida KT2440

Subject, 481 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  216 bits (550), Expect = 1e-60
 Identities = 141/481 (29%), Positives = 239/481 (49%), Gaps = 20/481 (4%)

Query: 9   RTIALLLSASLTAGCMVGPDYKQPEVALADHYVADAQPLTASDTSVGS--LDVWWEGFGD 66
           R   L LS    + C VGPD+++P+      + ++ Q   A+  +V     + WW+ F D
Sbjct: 3   RVAWLTLSLISLSACTVGPDFQRPQGPQVTQW-SEPQGRQAASRAVNDPLQERWWDVFHD 61

Query: 67  PLLSRLVTEALGQNLQLAQAQARVAQARAALGSATAALVPSAGINGQAARSRQS---VET 123
             LS L   AL  NL L  A +R+ Q+RA     TA   P+   NG   R R S   +  
Sbjct: 62  EQLSALTRRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSD 121

Query: 124 PLGQLLNSTPDYDRYGNSYELNLQASWEIDLFGGLRRDRQAAVGEYQASEAGAIATRLAV 183
           P G    S        N +++   ASWE+D +G ++R+ +AA    Q +E    A  L+V
Sbjct: 122 PSGNNGRSA------FNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSV 175

Query: 184 AAQTADIYTTVRGLQARLAIAQNQVKTQQDLLAKVNLLNRKGLAPDYEVRQTEGELSQVE 243
            A+TA  Y  +RG+Q   A+ +  +   +  L    L    G+A D +V +   +++ +E
Sbjct: 176 LAETAQNYIQLRGVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIE 235

Query: 244 ATVPVLRAGLDAALNALDVMLGSTPGTHRAQMAIASSIPQVPAFAQIGKPSDLLRRRPDL 303
           A +P L+   D  +NAL +++G  P    AQ++  +++PQ      IG PS+L  RRPD+
Sbjct: 236 ARLPDLQQRQDQLINALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDI 295

Query: 304 IAAERRLMAANAMIGSAISEYYPKFSIGGLIGSASTSGGTFFTGDANQSAVLLGLRWRLF 363
             AE RL AA A IG A  ++YP+ ++ G +GS +     F +  +   A        LF
Sbjct: 296 RQAEARLHAATASIGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLF 355

Query: 364 DFSRINAQIDQAKGREAEALAIYRQSVLEASEDVETAL----SALINRQAQAQSLKRGEV 419
           +  R+   ++  + ++ EA   Y+Q+VL A  +++  L    ++ + R + A+++++ ++
Sbjct: 356 NGGRLQGMLNLREAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQI 415

Query: 420 SLERARRSSFVAFQNGVASLIDVLNADQQLLRTSDFRAVAQTEAARAAIAAYLALGGGWS 479
           +L  A++     +  GV   ++VL     LL T +    + T  + A +  Y ALGGGW 
Sbjct: 416 ALRTAQQQ----YVEGVVDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGWE 471

Query: 480 T 480
           +
Sbjct: 472 S 472