Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) from Pseudomonas putida KT2440

Subject, 323 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 1e-38
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 6/270 (2%)

Query: 16  EQTPIRASSLIITLYGDAIEPHGGTVWLGSLINLLEPIGINERLIRTSIFRLTKEGWLTA 75
           +Q P++  SLI++++GD+I P GG++WLG ++ L    G+ E L+RTS  RL  +GWL  
Sbjct: 24  DQQPVKPKSLIMSIFGDSIVPRGGSIWLGGIVKLAASFGLAEPLVRTSTLRLASDGWLMR 83

Query: 76  EKVGRRSYYSLTGTGRRRFEKAFKRVYSPSQPAWDGAWTL--VLLSQLEAGKRKAVREEL 133
           +++G+ S+YS+T            ++Y  +       WT+  +   QL+  +   +   L
Sbjct: 84  QQIGKLSFYSMTEAYAAADAAYQSQIYGAAASLRRNGWTIFKMFAEQLDRKEVYRLTNIL 143

Query: 134 EWQGFGVMAPNLLGCPRADRADLVATLHDLEAGDDSIVFETHTQEVL-ASKAMRAQVRES 192
              GFG +   +   P   R+ +   +   + GD  + F + T      S A  A+V  +
Sbjct: 144 NRNGFGQLGSGVYIHPSIARSVMQHIIRRTDGGDAGVAFFSSTLRAQEGSSATLARV--A 201

Query: 193 WRIDELGQQYSEFIQLFRPLWQGLKEQPLLDAQDCFLARTLLIHEYRRLLLRDPQLPDEL 252
           W + EL   Y EFI+ F  +   L +    + Q  F  RTL++H +RRL L+DP+LP E 
Sbjct: 202 WDLSELHSGYQEFIETFERV-PTLLDTGEPEPQTAFALRTLMVHRFRRLALKDPRLPAES 260

Query: 253 LPGDWEGRAARQLCRNLYRLVFAKAEEWLN 282
           L   W G AA  L  N Y+ +   +E +L+
Sbjct: 261 LSEPWPGEAAFDLMSNSYQRLVPPSEIYLD 290