Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) from Pseudomonas putida KT2440

Subject, 308 a.a., phenylacetic acid degradation operon negative regulatory protein PaaX from Magnetospirillum magneticum AMB-1

 Score =  293 bits (750), Expect = 3e-84
 Identities = 143/288 (49%), Positives = 194/288 (67%), Gaps = 4/288 (1%)

Query: 21  RASSLIITLYGDAIEPHGGTVWLGSLINLLEPIGINERLIRTSIFRLTKEGWLTAEKVGR 80
           +A SLIIT+YGDAI  HGG+ WLGS+INL+EP+G+NER++RTS+FRL+KE WL++ ++GR
Sbjct: 19  KAKSLIITVYGDAISHHGGSAWLGSVINLVEPLGLNERIVRTSVFRLSKEAWLSSMQIGR 78

Query: 81  RSYYSLTGTGRRRFEKAFKRVYSPSQPAWDGAWTLVL--LSQLEAGKRKAVREELEWQGF 138
           RSYY LT  GRRRFE A  R+Y  +   WDG WTL +  +  ++A +R ++R +L W GF
Sbjct: 79  RSYYRLTEMGRRRFEAAHNRIYHFNGKPWDGRWTLAVTNIEGMDAERRDSLRRDLGWLGF 138

Query: 139 GVMAPNLLGCPRADRADLVATLHDLEAGDDSIVFETHTQEVLASKAMRAQVRESWRIDEL 198
           G +A  +L  P  DR+ +   L +    D +++     ++ +  +A+R  +   W +D L
Sbjct: 139 GQLASGVLVHP--DRSAVRQALAEAGVQDRAVMMVASAEDWVTPEALRDLIHTCWDLDRL 196

Query: 199 GQQYSEFIQLFRPLWQGLKEQPLLDAQDCFLARTLLIHEYRRLLLRDPQLPDELLPGDWE 258
              Y+EF+  FRPLWQ L     LD Q CF+ RTLL+H YRR LLRDP LPDELLP  W 
Sbjct: 197 AGDYNEFLDTFRPLWQALSGAGELDPQMCFVVRTLLMHGYRRALLRDPMLPDELLPAHWP 256

Query: 259 GRAARQLCRNLYRLVFAKAEEWLNAALETADGPLPDVSESFYKRFGGL 306
           G +AR LCRNLYRLV   AE  +   LETA+GP+P+   ++Y RFGGL
Sbjct: 257 GTSARVLCRNLYRLVQTAAETHVMGMLETAEGPVPEAHPAYYTRFGGL 304