Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  283 bits (724), Expect = 7e-81
 Identities = 169/425 (39%), Positives = 227/425 (53%), Gaps = 33/425 (7%)

Query: 22  VALPMPALADFIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPV 81
           VAL   A ADF+ DS A L +RN Y N D R   A  +K EEWGQ F    +SGFT+G V
Sbjct: 17  VALSPLASADFLSDSKANLSMRNFYFNNDNRDGTAAPSKTEEWGQAFILNYQSGFTDGTV 76

Query: 82  GFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGTL 141
           GFG+DA+G LGI LDS    R+ G      +  +  D+++  G T K R +KS LR G L
Sbjct: 77  GFGLDAIGMLGITLDSGAG-RHVGSSMIPNDDGKATDNWARGGATAKARFAKSELRYGYL 135

Query: 142 QPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGY--GAA 199
           +P LP++V ND RLL  SF GG +TS+D+D LT   G+L     R SS R  +    G  
Sbjct: 136 RPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQHTTGRGSSDRSGLAVAGGTQ 195

Query: 200 SSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSR 259
            S+  ++ G  Y +T    + YYYA L+D Y+Q F GLI   PL +  SL++DLRYF + 
Sbjct: 196 ESNTFNYAGADYQVTKDLMLQYYYANLEDYYQQHFAGLIHVLPLGDYGSLKTDLRYFKTT 255

Query: 260 NDG-----AERA-------------GNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFP 301
           +DG     A RA             G IDN  ++A F   +  H  TA +QQ+S DS F 
Sbjct: 256 SDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIYSLGPHAITAGYQQVSDDSNFA 315

Query: 302 FVN----------GGDPFTVNLVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTD 351
            +N          G   +     T  TF +AG  +   +Y YDF ++G+PGL     Y  
Sbjct: 316 QLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQYAYDFASLGVPGLKASVMYLK 375

Query: 352 GRHAETATVTNGRERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIG 411
           G H  TA+  +  E ERD  + YV+QSG FK+V   WRN   RS   +    D+NR+ + 
Sbjct: 376 GDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRS--EVARDQDQNRVFVN 433

Query: 412 YTLAL 416
           Y++ L
Sbjct: 434 YSIPL 438