Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  276 bits (706), Expect = 9e-79
 Identities = 160/403 (39%), Positives = 234/403 (58%), Gaps = 20/403 (4%)

Query: 30  ADFIGDSHARLELRNHYINRDFR--QSNAPQAKAEEWGQGFTAKLESGFTEGPVGFGVDA 87
           A FI  + A L+ RN++ +RD+   +  + Q++ +EW QGF     SG+T+G +G GVD 
Sbjct: 33  AGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGFILNASSGYTQGTLGVGVDV 92

Query: 88  LGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGTLQPILPV 147
            G LG KLDSS +   +GLLP   +S +  D+YS LG   K +VS++ L++G L P LPV
Sbjct: 93  TGLLGFKLDSSPEHARSGLLP-SLDSGKSADEYSRLGAAIKFKVSQTELKVGELMPNLPV 151

Query: 148 VVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSG--------RDDIG---Y 196
           ++++D RLL  ++QG +L S++  GLT +AG+    +LRDSS          D I     
Sbjct: 152 LLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRDSSNSQKMYALVNDPINPARL 211

Query: 197 GAASSDHLDFGGGSYAITP-QTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRY 255
              +SD  ++ G  YA    +T+V  + A+L+DIY+Q+F       PL    +L  +  Y
Sbjct: 212 ARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFYSFKHAEPLGSW-TLGVNAGY 270

Query: 256 FDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGG-DPFTVNLV 314
           FD+R DG++ AG+ DN    ++F+     H F   +QQ+ GD  F  V    +P    L 
Sbjct: 271 FDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDDGFIQVGANTNPMGNTLP 330

Query: 315 TYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDITY 374
           TY  F+  G  SWQVR+DY+FVA+G+PGL+   RY  GR  ET     GR+RERD D+ Y
Sbjct: 331 TYE-FSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVETGLGFEGRDRERDLDLAY 389

Query: 375 VIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLALW 417
           V+QSGP   + +R RNV  RS       +DENRLI+ YT+ ++
Sbjct: 390 VVQSGPLAGLGIRVRNVMARS--NYRTDIDENRLILSYTIKVF 430