Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  304 bits (779), Expect = 3e-87
 Identities = 166/409 (40%), Positives = 240/409 (58%), Gaps = 19/409 (4%)

Query: 20  ATVALPMPALADFIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEG 79
           AT+ +   A A F+ D    LELRN Y NRDFR   A Q+K +EW QGF   L+SGFTEG
Sbjct: 13  ATLLVAPYASAAFVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQGFILNLQSGFTEG 72

Query: 80  PVGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLG 139
           PVGFG+DA+G LG+KLDSS DR  +GLL +  +  +  D+Y +   T K R+ K+ LR+G
Sbjct: 73  PVGFGIDAMGLLGVKLDSSPDRTGSGLLAY-DSDRQVEDEYGKFVATAKARMGKTELRIG 131

Query: 140 TLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDI---GY 196
            + P++P++  N++RLL   F+GG LT  D+D LT  A R+     R+S+  + +   GY
Sbjct: 132 GVNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAVKQRNSTDFESLTATGY 191

Query: 197 GAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYF 256
               +DH ++    +      T S + A+L+D+Y+  F G+   +PL EG ++ +D+R F
Sbjct: 192 APVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIKVIKPLWEG-NVIADVRVF 250

Query: 257 DSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVNLVTY 316
           D+   G+++ G +DNR  ++ F   ++ H     +Q+  GD++F FVNG D +       
Sbjct: 251 DASETGSKKLGEVDNRTLSSYFAYSIKGHTIGGGYQKAWGDTSFAFVNGTDTYLFGESLV 310

Query: 317 NTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVT------------NGR 364
           +TFT      W  RYD+DF A+G+PGL F TRY  G       +T            +G+
Sbjct: 311 STFTAPEERVWFARYDFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLRLNGEDGK 370

Query: 365 ERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYT 413
           E ER TDI+YVIQSGP K VS +WRN T RS     ++ +ENRLI+ YT
Sbjct: 371 EWERVTDISYVIQSGPAKGVSFQWRNSTNRS--TYADSANENRLIMRYT 417