Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  272 bits (696), Expect = 1e-77
 Identities = 160/400 (40%), Positives = 236/400 (59%), Gaps = 14/400 (3%)

Query: 23  ALPMPALAD-FIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPV 81
           +LP+ ALA+ F+ D+ A L LRN Y+NRD+    A Q KAEEW Q F    +SG+T G V
Sbjct: 18  SLPLQALAEGFVDDAKASLTLRNFYMNRDYT-GTASQGKAEEWTQSFIFDFKSGYTPGVV 76

Query: 82  GFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGTL 141
           GFGVD LG   IKLD  +    T LLP   +   P DD+    L GK+RVS++ L++G  
Sbjct: 77  GFGVDVLGLYSIKLDGGKGTAGTQLLPVHDDGR-PADDFGRTALAGKMRVSRTELKVGEW 135

Query: 142 QPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGY---GA 198
            P LP++  +D R L  + QG  +TS +L GL+   G+  + + R+ +   D+      A
Sbjct: 136 SPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQDMSLFTRTA 195

Query: 199 ASSDHLDFGGGSYAITPQTT-VSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFD 257
            +SD  +F GG Y    + T V  +YA+L+DIY+Q++  +   +PL   V L ++L YF 
Sbjct: 196 FTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPLGNWV-LGANLGYFW 254

Query: 258 SRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTV-NLVTY 316
            ++DG  +AG ++NR  + +F+  +  + F    Q++ GD  +  VNG    T+ N    
Sbjct: 255 GKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMGDDEWFRVNGASGGTLANDAFG 314

Query: 317 NTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDITYVI 376
           +++  A   SWQVR+D++FV +GIPGL+ M RY  G +   A+ T GRE E    + YV+
Sbjct: 315 SSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNVHNAS-TQGRESE----LAYVV 369

Query: 377 QSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLAL 416
           QSGPFK ++L+WRN + R   G TN+ DENRLI+ Y L+L
Sbjct: 370 QSGPFKALNLKWRNSSQRRDWGSTNSFDENRLIVSYPLSL 409