Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  298 bits (763), Expect = 2e-85
 Identities = 160/405 (39%), Positives = 225/405 (55%), Gaps = 16/405 (3%)

Query: 24  LPMPALADFIGDSHARLELRNHYINRDFRQSNAPQAKAE--------EWGQGFTAKLESG 75
           LP+   A FI DS  +L+LRN Y N +FR      A+A         EW QGF    +SG
Sbjct: 18  LPVAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSG 77

Query: 76  FTEGPVGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKST 135
           FT+G +G GVDA+G LG++LDS R R  TGLLP   +     D+++  G+T K R+  + 
Sbjct: 78  FTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRA-ADEFASAGITAKARLGSTV 136

Query: 136 LRLGTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDI- 194
           ++ GTL P  PV+VYND RLL  ++QG  LTS D+D LT  AG L +   RDSS    + 
Sbjct: 137 VKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLY 196

Query: 195 --GYGAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSD 252
             GYG  +S    F G  YA++ Q  +SY++ +L+  YRQ F GL+   PL  GV L +D
Sbjct: 197 LDGYGGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPLGGGV-LTTD 255

Query: 253 LRYFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVN 312
           LRYF SR+ G    G IDN  F+   +     H   A +Q + G++  P+++G   ++ +
Sbjct: 256 LRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISGATVYSFS 315

Query: 313 LVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDI 372
            V    F      +W   Y Y+F A G+PGL+FMTRY  G +  +      +E ERD +I
Sbjct: 316 NVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGRSGG-EGIKEWERDAEI 374

Query: 373 TYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLALW 417
            YV+Q GP K + ++ RN  +RS        D NRL + Y +A+W
Sbjct: 375 AYVVQGGPLKGLGVKLRNYVYRS--DFARGRDSNRLYLTYDIAIW 417