Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  232 bits (591), Expect = 2e-65
 Identities = 143/417 (34%), Positives = 215/417 (51%), Gaps = 34/417 (8%)

Query: 32  FIGDSHARLELRNHYINRDFRQSNAP---------QAKAEEWGQGFTAKLESGFTEGPVG 82
           FI  S   +  RN Y NRD R S AP            +E W     +K  SGFT+G VG
Sbjct: 32  FIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIISKFNSGFTQGTVG 91

Query: 83  FGVDALGQLGIKLDSSRDRRNTGLLPFG----PNSHEPVDDYSELGLTGKVRVSKSTLRL 138
           FGVDA   +G+KLD+  D RN G   F      N  E  D+Y+++G   KVR+  + +++
Sbjct: 92  FGVDAFAMIGLKLDTG-DGRNGGRSSFDVLPVDNKGEARDEYTKVGGAAKVRLFDTIVKV 150

Query: 139 GTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDD----I 194
           G + P  PVV   D+RLL  SF+G  + +  + GLT   GRL   +   SS  +D     
Sbjct: 151 GDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQPVSSNLNDNFVTF 210

Query: 195 GYGAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLR 254
             G  +S  + +GGG Y+I    TVS Y ++L+D++ Q + G     PL++ ++L     
Sbjct: 211 YGGPVNSPWIGYGGGDYSINDNWTVSVYASQLKDVWNQYYAGTSVVYPLSDDLALIGGFN 270

Query: 255 YFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDP-FTVNL 313
           Y+ + ++G +R G  DN  ++A   +   AH    + Q+ +GD  F ++   D  F  N 
Sbjct: 271 YYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDDFDYLRQSDSIFVDNS 330

Query: 314 VTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETAT-------------- 359
           + Y+ F      SW +RYD +F + GIPGL+FMTRY  G  A+ +               
Sbjct: 331 IQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNP 390

Query: 360 VTNGRERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLAL 416
           + N +  ERD ++ YV+Q+GP KD+S R R  T R+     + +DE R+II Y L++
Sbjct: 391 LDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRA-TAFESDLDETRVIIEYPLSI 446