Pairwise Alignments

Query, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

Subject, 266 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

 Score =  132 bits (332), Expect = 8e-36
 Identities = 82/270 (30%), Positives = 146/270 (54%), Gaps = 11/270 (4%)

Query: 3   RAIWKGAISFGLVHIPVALNTAV-RTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDNI 61
           RA WKG +   LV   VA+  A    E+V F  L++ +   +  + V++V+GK + +D+ 
Sbjct: 4   RAFWKGYLKLSLVTCRVAMTPATSEREKVRFHTLNRATGNRIVSRYVDEVSGKPVSEDDE 63

Query: 62  VKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTPDRR-GG 120
            +G +     YV++ +EE+     E+T+TIDI SFV    I   + D P+YL PD   G 
Sbjct: 64  ARGYQTGDDSYVLVEDEELDDVALESTRTIDIESFVPRDSIGWVYLDKPHYLVPDDEVGA 123

Query: 121 KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA 180
           + +A++R  +E+T   AL+ +V++ R+   +L P    L++ TLR+ +EVR  +     A
Sbjct: 124 EAFAVIRSAMEETKTAALSRLVMYRRERGVMLEPRGRGLILWTLRYGDEVRHFD----GA 179

Query: 181 SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDT 240
              +   +K  L + K+L+ + +  ++P   HD  +  ++DL+   ASK K    +K   
Sbjct: 180 PEAEEAPDKATLTLVKKLISERTQAFEPAMVHDPVQDGLIDLI---ASKRKKRPAKKAAQ 236

Query: 241 GAAEK--GADILDLTELLKRSLGGKKPVKK 268
            A E+  G +++ + + L+RSL  +K  +K
Sbjct: 237 PAVEEPTGGNVVSIMDALRRSLSTEKGKRK 266