Pairwise Alignments

Query, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

Subject, 286 a.a., Ku domain protein from Sphingobium sp. HT1-2

 Score =  144 bits (364), Expect = 2e-39
 Identities = 91/287 (31%), Positives = 155/287 (54%), Gaps = 19/287 (6%)

Query: 2   ARAIWKGAISFGLVHIPVALNTAVRT-ERVDFDWLDKRSMEPVGYKRVNKVTGK-EIDKD 59
           ARA W+G I   LV IPV +  A ++   V F  + + + +P+ Y +V  VTG   +D +
Sbjct: 3   ARAFWQGQIKLALVSIPVEIYPATKSGAAVSFRQIHEPTGKPIHYDKV--VTGVGPVDPE 60

Query: 60  NIVKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTP-DRR 118
            I+KG E  KG YV++ ++EI   + E+ +T+D+  FVEA  I + +++ PY++ P D  
Sbjct: 61  EILKGFEISKGNYVLLEQDEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVVPADDL 120

Query: 119 GGKVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLEL 178
             + YA+LR+ L +T KV L  + +  R+ L  L+P    +V+  LR+ +EV   +T   
Sbjct: 121 AEEAYAVLRDALRQTRKVGLGQLSVRGREQLVSLKPCGRGMVLEVLRYADEVTKAQT--Y 178

Query: 179 DASVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVE-EKASKGKIEAVEK 237
              + D   ++  L++A  +++  + P+ PE++HD +   +  L++ +K +KGK    E 
Sbjct: 179 FRGLPDDTADEDMLDLAVSIIDKRTAPFNPEEFHDRYVDALHRLIDKKKKAKGKRIIEEV 238

Query: 238 GDTGAAEKGADILDLTELLKRSLG---------GKKPVKK--TRKAS 273
            D     K  +++DL   LK+S G         GK P K   TR+ S
Sbjct: 239 DDEPTDRKAGNVIDLMAALKKSAGEAGRKAPAKGKVPAKNAATRRKS 285