Pairwise Alignments

Query, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

Subject, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  141 bits (356), Expect = 1e-38
 Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 13/262 (4%)

Query: 3   RAIWKGAISFGLVHIPVALNTAVRT-ERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDNI 61
           RA WKG I +G V  PVAL TA  + ER+ F+ L++++   V  + V+  TG  +++D  
Sbjct: 5   RANWKGFIKYGEVACPVALYTAASSSERIAFNTLNRKTGNRVKREFVDSETGDPVERDEQ 64

Query: 62  VKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGGK 121
           VKG E E G+Y+++  EE+  A P++ +T+ I +F+   +I   +FD PYYL PD+ G  
Sbjct: 65  VKGYEVENGQYIILEPEEVAAAVPDSDKTLKIDAFIPCHEIDDVYFDKPYYLAPDKMGTD 124

Query: 122 VYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDAS 181
            + LLR+ ++K    A+A  VL  R    L+RP    L+  TL +  EVR  +  E    
Sbjct: 125 AFLLLRDGMKKAKVAAIARTVLFRRVRTVLIRPHGKGLIATTLNFDYEVRSSQ--EAFEE 182

Query: 182 VTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIE--AVEKGD 239
           + D K+E   LE+A+ ++    G +    + D +   + +LV     K KIE  A+ K  
Sbjct: 183 LPDLKIEGEMLELAEHIIGTKKGSFDASAFDDRYEAAVAELV-----KAKIEGRALPKKK 237

Query: 240 TGAAEKGADILDLTELLKRSLG 261
              A K +D+L   + L+ S G
Sbjct: 238 APPASKPSDLL---QALRESAG 256