Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 329 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  190 bits (482), Expect = 5e-53
 Identities = 107/301 (35%), Positives = 170/301 (56%), Gaps = 7/301 (2%)

Query: 5   TKLLTVAVALLLAGHASASERLTLRIGDQKGNMRAQLEAADALRDLPYDIRWAEFPAAAP 64
           T L   A   L A  A A  + TL +GDQ G +R+  EA+ AL   P+  RWA F  AAP
Sbjct: 19  TALSLAAAGSLRASFAQAQPQTTLVLGDQAGGLRSLFEASRALEGAPFAYRWANFQGAAP 78

Query: 65  LAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIA--VDKSDPYGTALLVRPEAPLRSAAE 122
           L EA    A+D  + GD P+L       P+K +A  V K+D  G  ++V+P++PLRS  +
Sbjct: 79  LFEAQRGAAVDTAMAGDLPVLAAAVGKTPLKIVATRVGKADSLG--IVVQPDSPLRSVTD 136

Query: 123 LKGKR--IATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWE 180
           L+GK   +++ RGSI  +    AL +AG+  ++V  +F+ P DA  A A+  +DAW+ + 
Sbjct: 137 LRGKTVIVSSARGSISQYQLYGALEEAGVKREEVTVKFVLPTDAAAAFASRQIDAWAIFN 196

Query: 181 PYTALAELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQVWANQ 240
           PY  +A   G GR+L +GRG++T   F+ A++ +L +P RRAA+  +L+RL  A  WA  
Sbjct: 197 PYYTIAVQQG-GRILRDGRGINTALGFITASEHSLADPARRAAIVQFLDRLGRAGDWALA 255

Query: 241 HLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMTERLD 300
           + + Y+++ + +   P+EA+R+   R  +  + +    +   Q  AD     G++  R+D
Sbjct: 256 NPEAYAQSYSQLTRLPIEASRIITARASVAGRPVSEADIVALQAVADRSARDGILPARVD 315

Query: 301 V 301
           V
Sbjct: 316 V 316