Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  139 bits (349), Expect = 1e-37
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 14/310 (4%)

Query: 1   MSIRTKLLTVAV----ALLLAGHASASERLTLRIGDQKGN-----MRAQLEAADALRDLP 51
           +S RT + T+A     A+L  G  + S  +T+R+G QK +     ++AQ      L  L 
Sbjct: 8   ISRRTAIATLAALGSGAVLAQG--AGSRPVTVRLGYQKSSTLIAVLKAQGVLEKQLAPLN 65

Query: 52  YDIRWAEFPAAAPLAEALNAGAIDAGI-IGDAPLLFVLASGAPVKAIAVDKSDPYGTALL 110
             + W EF +  PL EALN   +D    + D   +F  A+GA +  IA +   P   A++
Sbjct: 66  ATLSWHEFTSGLPLLEALNLDNLDISADVADTVPVFAQAAGADLTFIAQEAPSPAAQAIV 125

Query: 111 VRPEAPLRSAAELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALAN 170
           VR ++P+++ A+LKGK++   + +  H+L + AL +AGL+ +D+E  +L P D + A   
Sbjct: 126 VREDSPIKTVADLKGKKVGFAKAAGAHYLLIAALDKAGLSFRDIEPAYLTPADGRAAFEK 185

Query: 171 GSVDAWSTWEPYTALAELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNR 230
           G++DAW  W+P+ A A+   + RVL +G G+++   +  A+ K  +   R   L+     
Sbjct: 186 GAIDAWVVWDPFLAAAQRQSKVRVLADGAGIASYQRYYLASTKFAK--ARPDVLRVVYAE 243

Query: 231 LAAAQVWANQHLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYH 290
           L     W  Q+    +  LA + G           RR    + +  + +TEQQ  AD + 
Sbjct: 244 LEKTGKWVKQNPKDAATLLAPVWGLDAATIEQANGRRSYAVRPVVAEGLTEQQRIADAFF 303

Query: 291 THGLMTERLD 300
              L+  ++D
Sbjct: 304 AEKLLPRKID 313