Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 318 a.a., sulfonate ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score =  145 bits (365), Expect = 2e-39
 Identities = 99/312 (31%), Positives = 146/312 (46%), Gaps = 11/312 (3%)

Query: 4   RTKLLTVAVALLLAGHASASERL--TLRIGDQKGNM-----RAQLEAADALRDLPYDIRW 56
           R  L   A AL L   A+ ++     LRIG QKG +     R  LE    L  L   ++W
Sbjct: 9   RRLLQGTAAALALPSFAALAQAQGRQLRIGHQKGALSILKGRGTLEKR--LAPLGVSVKW 66

Query: 57  AEFPAAAPLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAP 116
            EF A     EALN G+ID G +G+AP +F  A+GAP+  +A     P   A+LV   + 
Sbjct: 67  TEFTAGPVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVATTLPRPQSEAVLVPKGSA 126

Query: 117 LRSAAELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAW 176
           +RS A+LKGK+IA  +GS  H+  +K   + GL   D+   +L P DA+ A   GSVDAW
Sbjct: 127 IRSVADLKGKKIALNKGSNVHYFIVKLAEKHGLAYSDLNLVYLPPSDARAAFEKGSVDAW 186

Query: 177 STWEPYTALAELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQV 236
             W+P+ A AE   + R+L +  G+     +  ++   + +     A+   +  +    V
Sbjct: 187 VIWDPFLAAAEKLLEARILADATGVVGNRGYYFSSLGFVAKNADVLAIA--IEEINKVDV 244

Query: 237 WANQHLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMT 296
           W   H    +   A + G P   A L   R       I    + EQQ  AD +    L+ 
Sbjct: 245 WGTAHKSELAAEFATLWGLPKPVADLTVARAAYGTSPISKAVLAEQQKIADTFFELKLIP 304

Query: 297 ERLDVAPTFATG 308
            +++V    A G
Sbjct: 305 RKINVFEAAAAG 316